Factsheet for TraesCS3A01G181500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 4
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, peroxisome, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

golgi: 23128297

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G186300.1	Wheat	mitochondrion	99.23	99.23
TraesCS3B01G211500.1	Wheat	golgi	98.21	98.97
Zm00001d049104_P001	Maize	cytosol, mitochondrion, plastid	43.88	90.53
HORVU3Hr1G037170.3	Barley	plastid	96.17	88.92
Os01t0265200-01	Rice	plastid	81.12	83.46
EES02734	Sorghum	mitochondrion	78.83	77.25
Zm00001d040351_P005	Maize	mitochondrion	78.83	76.11
GSMUA_Achr11P...	Banana	extracellular	18.62	72.28
KRH75891	Soybean	cytosol, peroxisome	35.46	72.02
GSMUA_Achr9P03630_001	Banana	mitochondrion	67.09	69.76
VIT_08s0007g02230.t01	Wine grape	cytosol, mitochondrion, plastid	62.5	64.3
PGSC0003DMT400030778	Potato	cytosol, peroxisome, plastid	61.73	63.68
GSMUA_Achr11P...	Banana	cytosol	20.41	63.49
Solyc09g005250.2.1	Tomato	plastid	60.97	62.89
KRH65751	Soybean	plastid	60.97	62.24
KRH49367	Soybean	plastid	60.2	61.78
Bra033473.1-P	Field mustard	plastid	58.42	60.1
CDY23168	Canola	plastid	58.42	60.1
CDX95305	Canola	plastid	58.16	59.84
AT3G51870.1	Thale cress	plastid	57.91	59.58
KRH00225	Soybean	cytosol, endoplasmic reticulum, peroxisome	43.88	54.26
TraesCS5A01G277400.1	Wheat	mitochondrion	21.94	32.58
TraesCS3A01G206300.1	Wheat	plastid	26.53	30.68
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	25.51	30.4
TraesCS3A01G251300.1	Wheat	cytosol, mitochondrion, plastid	25.77	29.97
TraesCS7A01G495700.1	Wheat	cytosol, plastid	15.82	29.38
TraesCS1A01G425000.1	Wheat	cytosol	26.28	29.1
TraesCS6A01G187900.2	Wheat	cytosol	24.74	28.96
TraesCS7A01G061900.2	Wheat	cytosol	24.74	28.96
TraesCS4A01G093400.1	Wheat	cytosol	23.98	27.49
TraesCS5A01G301600.1	Wheat	plastid	22.19	26.52
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	21.43	25.0
TraesCS4A01G428000.1	Wheat	mitochondrion	24.23	24.68
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	26.28	24.35
TraesCS4A01G427000.1	Wheat	mitochondrion	23.21	24.33
TraesCS7A01G252500.1	Wheat	cytosol	21.17	22.55
TraesCS5A01G274600.1	Wheat	cytosol, plastid	21.94	22.45
TraesCS1A01G115500.1	Wheat	golgi	23.21	22.03
TraesCS6A01G175100.1	Wheat	plastid	22.19	20.09
TraesCS7A01G376600.1	Wheat	cytosol, plastid	22.96	17.31

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009605	GO:GO:0009607
GO:GO:0009624	GO:GO:0009941	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089
PANTHER:PTHR24089:SF619	SUPFAM:SSF103506	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G181500	EnsemblPlants:TraesCS3A01G181500.1	SEG:seg

Description

No Description!

Coordinates

chr3A:-:209653346..209656666

Molecular Weight (calculated)

42348.9 Da

IEP (calculated)

9.881

GRAVY (calculated)

0.021

Length

392 amino acids

Sequence
(BLAST)

001: MSHRRVEACD SWRPPPVPGH APALLLRAGN PWGRSYPPCA FASLSVREGG AAAVKAEDVE EEKERTLAQV AAEVSGTKGK MPPVAQLLKH PLALLALVPS
101: SVALFAAGAG AGAVAKTVTA PLDRVKLLMQ THSVRMAGES TKGIGFVQAM AEIGKEEGIK GYWKGNLPQV IRIIPYSAVQ LFSYEVYKKV FRRKDGELTV
201: FGRLAAGACA GMTSTLVTYP LDVLRLRLAV QSGHSTMSQV ALNMLREEGL ASFYGGLGPS LIGIAPYIAV NFCVFDLMKK SVPEKYKSRP ETSLATALLS
301: ATFATLMCYP LDTVRRQMQM KGTPYNTIFD AIPGIVERDG LVGLYRGFVP NALKNLPNSS IKLTAFDTMK ILISTGQKEL EKIMQENQEK TS

Best Arabidopsis Sequence Match ( AT5G01500.1 )
(BLAST)

001: MGEEKSLLQF RSFPSLKTSD FALTEEPSWR LENNVSSNRR RGNKRSGGVF TNFASLSVAI RRDRRESTFN GRNGGGGGAF ASVSVVIPKE EDEFAPTSAQ
101: LLKNPIALLS IVPKDAALFF AGAFAGAAAK SVTAPLDRIK LLMQTHGVRA GQQSAKKAIG FIEAITLIGK EEGIKGYWKG NLPQVIRIVP YSAVQLFAYE
201: TYKKLFRGKD GQLSVLGRLG AGACAGMTST LITYPLDVLR LRLAVEPGYR TMSQVALNML REEGVASFYN GLGPSLLSIA PYIAINFCVF DLVKKSLPEK
301: YQQKTQSSLL TAVVAAAIAT GTCYPLDTIR RQMQLKGTPY KSVLDAFSGI IAREGVVGLY RGFVPNALKS MPNSSIKLTT FDIVKKLIAA SEKEIQRIAD
401: DNRKKASPNT IDEQT

Arabidopsis Description

TAACThylakoid ADP,ATP carrier protein, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.