Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68843 | Canola | cytosol | 39.81 | 64.12 |
| KRH15889 | Soybean | endoplasmic reticulum | 72.51 | 64.02 |
| GSMUA_Achr7P10000_001 | Banana | mitochondrion | 57.82 | 52.36 |
| TraesCS7D01G483000.1 | Wheat | cytosol | 97.63 | 48.7 |
| TraesCS7B01G401600.1 | Wheat | cytosol | 97.63 | 48.58 |
| HORVU7Hr1G111040.2 | Barley | cytosol | 97.16 | 48.58 |
| Zm00001d046400_P002 | Maize | mitochondrion | 91.94 | 46.19 |
| Os06t0602700-01 | Rice | plastid | 91.94 | 45.86 |
| EER90006 | Sorghum | plastid | 90.05 | 45.13 |
| GSMUA_Achr7P10070_001 | Banana | cytosol | 79.62 | 43.52 |
| TraesCS1A01G115500.1 | Wheat | golgi | 80.57 | 41.16 |
| GSMUA_Achr6P05150_001 | Banana | cytosol, plastid, vacuole | 75.83 | 39.8 |
| VIT_04s0008g05240.t01 | Wine grape | cytosol | 73.93 | 39.29 |
| KRH52458 | Soybean | extracellular | 72.51 | 39.13 |
| CDX68841 | Canola | cytosol | 69.67 | 38.99 |
| KRH61786 | Soybean | cytosol, nucleus, plastid | 71.56 | 38.62 |
| CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 69.67 | 38.48 |
| Bra011344.1-P | Field mustard | cytosol | 69.67 | 38.48 |
| Bra007793.1-P | Field mustard | cytosol | 72.51 | 38.44 |
| CDY11524 | Canola | cytosol | 72.51 | 38.44 |
| CDX76755 | Canola | cytosol | 72.04 | 38.29 |
| PGSC0003DMT400053564 | Potato | cytosol, nucleus, plastid | 72.04 | 38.19 |
| Solyc08g061090.2.1 | Tomato | plastid | 71.56 | 37.94 |
| KRH03708 | Soybean | cytosol, mitochondrion, nucleus, plastid | 72.99 | 37.65 |
| VIT_11s0016g05110.t01 | Wine grape | cytosol | 71.09 | 37.5 |
| TraesCS6A01G175100.1 | Wheat | plastid | 76.78 | 37.41 |
| AT4G32400.1 | Thale cress | cytosol | 68.72 | 36.99 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 78.2 | 36.91 |
| KRH05133 | Soybean | mitochondrion | 71.56 | 36.12 |
| TraesCS7A01G252500.1 | Wheat | cytosol | 39.34 | 22.55 |
| TraesCS5A01G274600.1 | Wheat | cytosol, plastid | 40.28 | 22.19 |
| TraesCS5A01G277400.1 | Wheat | mitochondrion | 27.01 | 21.59 |
| TraesCS3A01G454400.1 | Wheat | cytoskeleton, cytosol, plastid | 33.65 | 21.13 |
| TraesCS3A01G058200.1 | Wheat | cytosol, mitochondrion, peroxisome | 32.7 | 20.97 |
| TraesCS6A01G187900.2 | Wheat | cytosol | 31.75 | 20.0 |
| TraesCS1A01G425000.1 | Wheat | cytosol | 33.18 | 19.77 |
| TraesCS7A01G061900.2 | Wheat | cytosol | 31.28 | 19.7 |
| TraesCS4A01G093400.1 | Wheat | cytosol | 31.75 | 19.59 |
| TraesCS5A01G301600.1 | Wheat | plastid | 30.33 | 19.51 |
| TraesCS3A01G206300.1 | Wheat | plastid | 29.38 | 18.29 |
| TraesCS3A01G251300.1 | Wheat | cytosol, mitochondrion, plastid | 28.91 | 18.1 |
| TraesCS4A01G407200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 34.6 | 17.26 |
| TraesCS4A01G428000.1 | Wheat | mitochondrion | 31.28 | 17.14 |
| TraesCS3A01G181500.1 | Wheat | golgi | 29.38 | 15.82 |
| TraesCS4A01G427000.1 | Wheat | mitochondrion | 27.49 | 15.51 |
| TraesCS7A01G376600.1 | Wheat | cytosol, plastid | 33.65 | 13.65 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G495700.1 | EnsemblPlantsGene:TraesCS7A01G495700 | Gene3D:1.50.40.10 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF358 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | SEG:seg | SUPFAM:SSF103506 |
| MapMan:24.2.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:685904921..685905634
Molecular Weight (calculated)
23092.3 Da
IEP (calculated)
8.540
GRAVY (calculated)
0.069
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLFAFDTAK KFLTPKGDES SKTPFPPSLV AGALAGVSST LCTYPLELIK TRLTIEKDVY DNFLHCLVKI VREEGPSELY RGLTPSLIGV VPYAATNYYA
101: YDTLRKLYRK TFKQEEISNL ATLLIGSAAG AISSTATFPL EVARKQMQAG AVGGRQVYKN VFHALYCIME KEGMGGLYKG LGPSCIKLMP AAGISFMCYE
201: ACKKILVEAE E
101: YDTLRKLYRK TFKQEEISNL ATLLIGSAAG AISSTATFPL EVARKQMQAG AVGGRQVYKN VFHALYCIME KEGMGGLYKG LGPSCIKLMP AAGISFMCYE
201: ACKKILVEAE E
001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
Arabidopsis Description
BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.