Factsheet for TraesCS4A01G427000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G056700.1	Wheat	cytosol	74.06	80.76
TraesCS7A01G061900.2	Wheat	cytosol	71.39	79.7
TraesCS6A01G187900.2	Wheat	cytosol	70.59	78.81
HORVU6Hr1G042080.7	Barley	cytosol	70.05	77.98
TraesCS4A01G428000.1	Wheat	mitochondrion	79.41	77.14
KXG29836	Sorghum	cytosol, mitochondrion, plastid	66.04	73.51
Zm00001d016299_P001	Maize	cytosol, mitochondrion, plastid	65.78	73.43
GSMUA_Achr7P09310_001	Banana	cytosol	57.49	62.14
GSMUA_Achr10P...	Banana	cytosol	56.95	61.38
Os02t0226300-00	Rice	cytosol, mitochondrion, plastid	57.22	59.94
VIT_11s0016g02470.t01	Wine grape	cytosol	54.01	59.24
Solyc12g008770.1.1	Tomato	extracellular	53.48	59.17
PGSC0003DMT400000910	Potato	cytosol	53.74	58.77
KRH49045	Soybean	cytosol	50.53	58.51
AT4G26180.1	Thale cress	cytosol	51.07	57.7
CDY68466	Canola	cytosol	50.8	57.06
Bra026457.1-P	Field mustard	cytosol	50.8	56.89
CDX94361	Canola	cytosol	50.8	56.89
TraesCS3A01G206300.1	Wheat	plastid	43.58	48.08
TraesCS3A01G251300.1	Wheat	cytosol, mitochondrion, plastid	41.18	45.7
TraesCS5A01G277400.1	Wheat	mitochondrion	30.48	43.18
TraesCS5A01G301600.1	Wheat	plastid	29.41	33.54
TraesCS1A01G425000.1	Wheat	cytosol	28.88	30.51
TraesCS7A01G495700.1	Wheat	cytosol, plastid	15.51	27.49
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	23.26	26.44
TraesCS4A01G093400.1	Wheat	cytosol	23.53	25.73
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	22.19	24.7
TraesCS3A01G181500.1	Wheat	golgi	24.33	23.21
TraesCS7A01G252500.1	Wheat	cytosol	19.79	20.11
TraesCS1A01G115500.1	Wheat	golgi	22.19	20.1
TraesCS6A01G175100.1	Wheat	plastid	22.99	19.86
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	21.93	19.39
TraesCS5A01G274600.1	Wheat	cytosol, plastid	18.18	17.75
TraesCS7A01G376600.1	Wheat	cytosol, plastid	24.06	17.31

Protein Annotations

EnsemblPlants:TraesCS4A01G427000.1	EnsemblPlantsGene:TraesCS4A01G427000	Gene3D:1.50.40.10	GO:GO:0006810	GO:GO:0008150	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF245	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926	SUPFAM:SSF103506	MapMan:24.2.13

Description

No Description!

Coordinates

chr4A:-:698104314..698107018

Molecular Weight (calculated)

41560.1 Da

IEP (calculated)

10.647

GRAVY (calculated)

0.006

Length

374 amino acids

Sequence
(BLAST)

001: MRLNHFLTLD RSWAAWRPPS ATKQLTKTAY IWVPCPVAPY VRSAHTHTIH FRLSLLLHFH TIGARLTPSL QRGVRAGTTT QAAAGLMEAA ERGGWALPLT
101: VRELIAGWVA GGVAKCAVAP LERVKILLQT RRAEFRGSGL IGSFRTIYRT EGPLGFYRGN GASVARIVPY AALHYMAYEE YRRWIILGFP NVQQGPVLDL
201: VAGSIAGGTA VVSTYPLDLV RTKMAYQVKG AVSLSLREPT EQVYKGILDC LKTVYRQNGL KGLYRGMAPS LYGIFPYSGL KFYFYEKMKT RVPEEHRKDI
301: IPKLACGSVA GLLGQTITYP LDVVRRQMQV QALSSSNLVK GKETFGSLAM IVKQQGWKQL FSGLSINYLK VRHL

Best Arabidopsis Sequence Match ( AT1G14560.1 )
(BLAST)

001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A

Arabidopsis Description

COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.