Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026457.1-P | Field mustard | cytosol | 98.8 | 98.5 |
| CDX94361 | Canola | cytosol | 97.0 | 96.71 |
| AT4G26180.1 | Thale cress | cytosol | 90.99 | 91.54 |
| VIT_11s0016g02470.t01 | Wine grape | cytosol | 72.37 | 70.67 |
| Solyc12g008770.1.1 | Tomato | extracellular | 71.47 | 70.41 |
| PGSC0003DMT400000910 | Potato | cytosol | 71.17 | 69.3 |
| KRH49045 | Soybean | cytosol | 66.67 | 68.73 |
| KXG29836 | Sorghum | cytosol, mitochondrion, plastid | 66.37 | 65.77 |
| Zm00001d016299_P001 | Maize | cytosol, mitochondrion, plastid | 66.07 | 65.67 |
| TraesCS6D01G176300.3 | Wheat | cytosol | 64.56 | 64.18 |
| GSMUA_Achr10P... | Banana | cytosol | 66.67 | 63.98 |
| TraesCS6B01G231800.3 | Wheat | cytosol | 64.26 | 63.88 |
| TraesCS6A01G187900.2 | Wheat | cytosol | 63.96 | 63.58 |
| HORVU6Hr1G042080.7 | Barley | cytosol | 63.96 | 63.39 |
| TraesCS7A01G061900.2 | Wheat | cytosol | 62.16 | 61.79 |
| TraesCS7D01G056700.1 | Wheat | cytosol | 63.06 | 61.22 |
| GSMUA_Achr7P09310_001 | Banana | cytosol | 60.96 | 58.67 |
| CDX84024 | Canola | cytosol | 55.26 | 55.93 |
| CDX96850 | Canola | cytosol | 55.26 | 55.59 |
| CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 54.05 | 55.05 |
| TraesCS4A01G428000.1 | Wheat | mitochondrion | 62.16 | 53.77 |
| Os02t0226300-00 | Rice | cytosol, mitochondrion, plastid | 57.06 | 53.22 |
| TraesCS4A01G427000.1 | Wheat | mitochondrion | 57.06 | 50.8 |
| CDY67915 | Canola | cytosol | 36.94 | 48.81 |
| CDY01954 | Canola | mitochondrion | 21.92 | 37.06 |
| CDX71722 | Canola | cytosol | 36.04 | 35.5 |
| CDY11371 | Canola | cytosol | 36.04 | 35.4 |
| CDY48505 | Canola | cytosol | 36.04 | 34.29 |
| CDY07175 | Canola | cytosol | 36.04 | 34.29 |
| CDX74363 | Canola | cytosol | 36.04 | 33.99 |
| CDX91877 | Canola | cytosol | 36.04 | 33.99 |
| CDY07764 | Canola | plastid | 34.23 | 33.53 |
| CDY59491 | Canola | cytosol | 33.93 | 33.24 |
| CDY66909 | Canola | cytosol, mitochondrion, plastid | 12.01 | 32.79 |
| CDX93344 | Canola | plastid | 33.03 | 31.88 |
| CDY18420 | Canola | plastid | 33.03 | 31.88 |
| CDX70930 | Canola | cytosol | 18.32 | 31.44 |
| CDX68843 | Canola | cytosol | 12.31 | 31.3 |
| CDY13155 | Canola | cytosol | 31.83 | 30.29 |
| CDY40244 | Canola | plastid | 30.03 | 29.85 |
| CDX76183 | Canola | cytosol | 31.23 | 29.71 |
| CDY41199 | Canola | plastid | 30.03 | 27.78 |
| CDX68841 | Canola | cytosol | 30.33 | 26.79 |
| CDX86261 | Canola | cytosol | 26.73 | 26.41 |
| CDX85385 | Canola | cytosol | 26.73 | 26.41 |
| CDY56673 | Canola | cytosol | 26.73 | 26.25 |
| CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 30.03 | 26.18 |
| CDY19928 | Canola | cytosol | 26.13 | 25.97 |
| CDX97455 | Canola | plastid | 11.71 | 25.83 |
| CDX76755 | Canola | cytosol | 30.63 | 25.69 |
| CDY11524 | Canola | cytosol | 30.63 | 25.63 |
| CDY23168 | Canola | plastid | 29.13 | 25.46 |
| CDX95305 | Canola | plastid | 29.13 | 25.46 |
| CDX80771 | Canola | cytosol, plastid | 30.03 | 24.75 |
| CDY11199 | Canola | plastid | 30.03 | 24.69 |
| CDX68026 | Canola | plastid | 27.93 | 23.43 |
| CDX79251 | Canola | plastid | 27.93 | 23.37 |
| CDY36050 | Canola | cytosol, plastid | 23.12 | 22.13 |
| CDX82257 | Canola | cytosol | 23.12 | 22.13 |
| CDY14527 | Canola | plastid | 27.33 | 21.82 |
| CDY08834 | Canola | plastid | 27.33 | 21.77 |
| CDY00231 | Canola | cytosol | 30.93 | 21.59 |
| CDX86953 | Canola | cytosol | 30.93 | 21.59 |
| CDY29805 | Canola | cytosol | 22.52 | 21.55 |
| CDY25400 | Canola | cytosol, plastid | 22.52 | 21.55 |
| CDY31292 | Canola | cytosol | 22.52 | 21.43 |
| CDY14050 | Canola | cytosol | 29.73 | 21.15 |
| CDY55175 | Canola | cytosol | 29.73 | 21.15 |
| CDX70028 | Canola | cytosol | 24.62 | 20.65 |
| CDX71683 | Canola | cytosol | 30.33 | 20.2 |
| CDY05832 | Canola | cytosol | 30.03 | 20.0 |
| CDX98981 | Canola | endoplasmic reticulum, golgi | 22.82 | 17.84 |
| CDY33993 | Canola | plastid | 18.62 | 17.37 |
| CDY39471 | Canola | cytosol | 17.72 | 14.71 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:A0A078JS54 | UniProt:A0A078JS54 | EnsemblPlants:CDY68466 | ProteinID:CDY68466 |
| ProteinID:CDY68466.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005743 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00074776001 | InterPro:Graves_DC | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier |
| InterPro:Mt_carrier_dom_sf | PFAM:PF00153 | PRINTS:PR00926 | PRINTS:PR00928 | PFscan:PS50920 | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF245 | SUPFAM:SSF103506 | UniParc:UPI0004EE22D1 | SEG:seg | : | : |
Description
BnaA01g35260DBnaA01g35260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JS54]
Coordinates
chrLK037389:-:3353..5051
Molecular Weight (calculated)
37316.6 Da
IEP (calculated)
10.070
GRAVY (calculated)
-0.110
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESEEKNGI LDSMPVFAKE LIAGGVTGGI AKTAVAPLER IKILFQTRRD EFKRIGLMGS INKIGKTEGL MGFYRGNGAS VARIVPYAAL HYMAYEEYRR
101: WIIFGFPETT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK AQSKAVIPLE QIVYRGITDC FSRTYRESGF RGLYRGVAPS MYGIFPYAGL
201: KFYFYEEMKR HVPAEHKKDI SLKLVCGSVA GLLGQTLTYP LDVVRRQMQV ERLYAAAKEE TVRRGTMQTL VKIAREEGWK QLFSGLSINY LKVVPSVAIG
301: FTVYDVMKLH LRVPSREETE AEDRTTRKRN TLS
101: WIIFGFPETT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK AQSKAVIPLE QIVYRGITDC FSRTYRESGF RGLYRGVAPS MYGIFPYAGL
201: KFYFYEEMKR HVPAEHKKDI SLKLVCGSVA GLLGQTLTYP LDVVRRQMQV ERLYAAAKEE TVRRGTMQTL VKIAREEGWK QLFSGLSINY LKVVPSVAIG
301: FTVYDVMKLH LRVPSREETE AEDRTTRKRN TLS
001: MAEGEEKNGI IDSIPLFAKE LIAGGVTGGI AKTAVAPLER IKILFQTRRD EFKRIGLVGS INKIGKTEGL MGFYRGNGAS VARIVPYAAL HYMAYEEYRR
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK TQVKAIPVEQ IIYRGIVDCF SRTYRESGAR GLYRGVAPSL YGIFPYAGLK
201: FYFYEEMKRH VPPEHKQDIS LKLVCGSVAG LLGQTLTYPL DVVRRQMQVE RLYSAVKEET RRGTMQTLFK IAREEGWKQL FSGLSINYLK VVPSVAIGFT
301: VYDIMKLHLR VPPREEPEAE AVTTRKRKVF T
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK TQVKAIPVEQ IIYRGIVDCF SRTYRESGAR GLYRGVAPSL YGIFPYAGLK
201: FYFYEEMKRH VPPEHKQDIS LKLVCGSVAG LLGQTLTYPL DVVRRQMQVE RLYSAVKEET RRGTMQTLFK IAREEGWKQL FSGLSINYLK VVPSVAIGFT
301: VYDIMKLHLR VPPREEPEAE AVTTRKRKVF T
Arabidopsis Description
COAC2Mitochondrial carrier protein CoAc2 [Source:UniProtKB/Swiss-Prot;Acc:F4JU70]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.