CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11199	Canola	plastid	98.76	98.52
Bra005684.1-P	Field mustard	plastid	98.51	98.51
AT5G01500.1	Thale cress	cytosol	91.83	89.4
CDX70930	Canola	cytosol	38.86	80.93
CDY23168	Canola	plastid	65.1	69.03
CDX95305	Canola	plastid	64.6	68.5
CDX71722	Canola	cytosol	25.5	30.47
CDY48505	Canola	cytosol	26.24	30.29
CDY07175	Canola	cytosol	26.24	30.29
CDY11371	Canola	cytosol	25.25	30.09
CDY68466	Canola	cytosol	24.75	30.03
CDX74363	Canola	cytosol	26.24	30.03
CDX91877	Canola	cytosol	26.24	30.03
CDY01954	Canola	mitochondrion	14.6	29.95
CDX94361	Canola	cytosol	24.75	29.94
CDX68843	Canola	cytosol	9.65	29.77
CDY66909	Canola	cytosol, mitochondrion, plastid	8.91	29.51
CDX84024	Canola	cytosol	23.76	29.18
CDY45268	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	23.51	29.05
CDX96850	Canola	cytosol	23.76	29.0
CDY59491	Canola	cytosol	23.27	27.65
CDY07764	Canola	plastid	23.27	27.65
CDY40244	Canola	plastid	22.77	27.46
CDY13155	Canola	cytosol	23.76	27.43
CDX76183	Canola	cytosol	23.76	27.43
CDY67915	Canola	cytosol	17.08	27.38
CDX82257	Canola	cytosol	23.51	27.3
CDY18420	Canola	plastid	23.27	27.25
CDX93344	Canola	plastid	23.27	27.25
CDX97455	Canola	plastid	10.15	27.15
CDY36050	Canola	cytosol, plastid	23.02	26.72
CDX68841	Canola	cytosol	24.75	26.53
CDY19928	Canola	cytosol	21.78	26.27
CDY56673	Canola	cytosol	21.53	25.66
CDY41199	Canola	plastid	22.77	25.56
CDX85385	Canola	cytosol	21.29	25.52
CDX86261	Canola	cytosol	21.29	25.52
CDX75241	Canola	cytoskeleton, cytosol, nucleus	24.01	25.39
CDY25400	Canola	cytosol, plastid	21.78	25.29
CDY29805	Canola	cytosol	21.78	25.29
CDX76755	Canola	cytosol	24.75	25.19
CDY11524	Canola	cytosol	24.75	25.13
CDX68026	Canola	plastid	23.51	23.93
CDY31292	Canola	cytosol	20.54	23.71
CDY08834	Canola	plastid	24.5	23.68
CDX79251	Canola	plastid	23.27	23.62
CDY14527	Canola	plastid	24.26	23.5
CDY14050	Canola	cytosol	24.75	21.37
CDY55175	Canola	cytosol	24.5	21.15
CDY33993	Canola	plastid	18.56	21.01
CDY00231	Canola	cytosol	24.5	20.75
CDX86953	Canola	cytosol	24.5	20.75
CDX70028	Canola	cytosol	20.05	20.4
CDX71683	Canola	cytosol	23.51	19.0
CDY05832	Canola	cytosol	23.51	19.0
CDX98981	Canola	endoplasmic reticulum, golgi	19.55	18.54
CDY39471	Canola	cytosol	15.59	15.71

Protein Annotations

EnsemblPlants:CDX80771	EnsemblPlantsGene:GSBRNA2T00134144001	Gene3D:1.50.40.10	GO:A0A078CUD1	GO:GO:0006810	GO:GO:0008150
GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PANTHER:PTHR24089	PANTHER:PTHR24089:SF619	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926	ProteinID:CDX80771
ProteinID:CDX80771.1	SEG:seg	SUPFAM:SSF103506	UniParc:UPI0004EC8AD3	MapMan:24.2.13	:

Description

BnaC03g00250D

Coordinates

chrLK031823:-:135994..138616

Molecular Weight (calculated)

43720.2 Da

IEP (calculated)

10.092

GRAVY (calculated)

-0.002

Length

404 amino acids

Sequence
(BLAST)

001: MGEEKSQLQF RSIPSLKTSD FALTSEPSWM LPSRGNTRSG GVLSNFASLS VAIRRDRRES GGAFASVSVV IPTKEEDDVF APTSAQLLKN PVALLSFVPK
101: DAALFFAGAF AGAAAKSVTA PLDRIKLLMQ THGVRAGQQS AKKAIGFIEA IMLIGREEGV KGYWKGNLPQ VIRIVPYSAV QLFAYETYKK LFRGEDGQLS
201: VLGRLGAGAC AGMTSTLITY PLDVLRLRLA VEPGYRTMSQ VALNMLREEG VASFYNGLGP SLLSIAPYIA LNFCVFDLVK KSLPEKYQKK TQASLLTAVV
301: AAAIATGTCY PLDTIRRQMQ LKGTPYKSVL DAFSGIIERE GVIGLYRGFV PNALKSMPNS SIKLTTFDIV KKLIAASEKE YQKIADDNRK KAAATPPPPT
401: TTDE

Best Arabidopsis Sequence Match ( AT5G01500.1 )
(BLAST)

001: MGEEKSLLQF RSFPSLKTSD FALTEEPSWR LENNVSSNRR RGNKRSGGVF TNFASLSVAI RRDRRESTFN GRNGGGGGAF ASVSVVIPKE EDEFAPTSAQ
101: LLKNPIALLS IVPKDAALFF AGAFAGAAAK SVTAPLDRIK LLMQTHGVRA GQQSAKKAIG FIEAITLIGK EEGIKGYWKG NLPQVIRIVP YSAVQLFAYE
201: TYKKLFRGKD GQLSVLGRLG AGACAGMTST LITYPLDVLR LRLAVEPGYR TMSQVALNML REEGVASFYN GLGPSLLSIA PYIAINFCVF DLVKKSLPEK
301: YQQKTQSSLL TAVVAAAIAT GTCYPLDTIR RQMQLKGTPY KSVLDAFSGI IAREGVVGLY RGFVPNALKS MPNSSIKLTT FDIVKKLIAA SEKEIQRIAD
401: DNRKKASPNT IDEQT

Arabidopsis Description

TAACThylakoid ADP,ATP carrier protein, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.