CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007793.1-P	Field mustard	cytosol	100.0	100.0
CDX76755	Canola	cytosol	98.74	98.99
CDX75241	Canola	cytoskeleton, cytosol, nucleus	78.89	82.2
CDX68841	Canola	cytosol	77.64	81.96
CDX68843	Canola	cytosol	25.88	78.63
KRH15889	Soybean	endoplasmic reticulum	44.22	73.64
TraesCS7A01G495700.1	Wheat	cytosol, plastid	38.44	72.51
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	69.6	69.6
Solyc08g061090.2.1	Tomato	plastid	69.35	69.35
VIT_04s0008g05240.t01	Wine grape	cytosol	68.59	68.77
KRH52458	Soybean	extracellular	66.83	68.03
KRH61786	Soybean	cytosol, nucleus, plastid	66.58	67.77
GSMUA_Achr7P10070_001	Banana	cytosol	61.56	63.47
KRH05133	Soybean	mitochondrion	65.58	62.44
Zm00001d009799_P001	Maize	plastid	63.07	61.82
Os05t0171300-01	Rice	mitochondrion, plastid	63.07	60.48
Zm00001d037640_P001	Maize	plastid	61.31	60.1
GSMUA_Achr7P10000_001	Banana	mitochondrion	35.18	60.09
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	60.05	59.45
HORVU1Hr1G025480.1	Barley	nucleus, peroxisome, vacuole	61.06	58.84
TraesCS1B01G135400.1	Wheat	cytosol	60.8	58.74
EES17800	Sorghum	cytosol	61.81	58.71
TraesCS1A01G115500.1	Wheat	golgi	60.8	58.6
Os06t0602700-01	Rice	plastid	62.06	58.39
TraesCS1D01G116900.1	Wheat	cytosol	60.55	58.07
Zm00001d046400_P002	Maize	mitochondrion	61.06	57.86
EER90006	Sorghum	plastid	61.06	57.72
HORVU7Hr1G111040.2	Barley	cytosol	60.05	56.64
TraesCS7B01G401600.1	Wheat	cytosol	60.3	56.6
TraesCS7D01G483000.1	Wheat	cytosol	59.8	56.26
GSMUA_Achr10P...	Banana	endoplasmic reticulum	58.79	52.35
TraesCS6B01G210000.1	Wheat	plastid	55.53	51.52
TraesCS6D01G168200.1	Wheat	golgi	55.28	51.28
Os02t0202400-01	Rice	plastid	54.27	50.82
TraesCS6A01G175100.1	Wheat	plastid	55.28	50.81
EES04720	Sorghum	plastid	53.02	48.51
Zm00001d015746_P001	Maize	plastid	52.51	47.83
CDX82257	Canola	cytosol	30.9	35.34
CDY29805	Canola	cytosol	30.9	35.34
CDY25400	Canola	cytosol, plastid	30.9	35.34
CDY36050	Canola	cytosol, plastid	30.4	34.77
CDY01954	Canola	mitochondrion	16.08	32.49
CDY11371	Canola	cytosol	27.64	32.45
CDX71722	Canola	cytosol	27.39	32.25
CDX74363	Canola	cytosol	28.39	32.01
CDX91877	Canola	cytosol	28.39	32.01
CDY07175	Canola	cytosol	28.14	32.0
CDY48505	Canola	cytosol	28.14	32.0
CDX70930	Canola	cytosol	15.33	31.44
CDY68466	Canola	cytosol	25.63	30.63
CDY66909	Canola	cytosol, mitochondrion, plastid	9.3	30.33
CDY59491	Canola	cytosol	25.88	30.29
CDY07764	Canola	plastid	25.88	30.29
CDX94361	Canola	cytosol	25.38	30.24
CDY18420	Canola	plastid	25.88	29.86
CDY40244	Canola	plastid	25.13	29.85
CDX96850	Canola	cytosol	24.62	29.61
CDX93344	Canola	plastid	25.63	29.57
CDX84024	Canola	cytosol	24.37	29.48
CDY13155	Canola	cytosol	25.63	29.14
CDY56673	Canola	cytosol	24.62	28.91
CDX76183	Canola	cytosol	25.38	28.86
CDY45268	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	23.12	28.13
CDY19928	Canola	cytosol	23.37	27.76
CDY41199	Canola	plastid	24.62	27.22
CDX86261	Canola	cytosol	22.61	26.71
CDX85385	Canola	cytosol	22.61	26.71
CDX97455	Canola	plastid	10.05	26.49
CDX68026	Canola	plastid	26.38	26.45
CDX79251	Canola	plastid	26.38	26.38
CDY14527	Canola	plastid	27.64	26.38
CDY31292	Canola	cytosol	23.12	26.29
CDY08834	Canola	plastid	27.39	26.08
CDY67915	Canola	cytosol	16.08	25.4
CDX80771	Canola	cytosol, plastid	25.13	24.75
CDY11199	Canola	plastid	25.13	24.69
CDY23168	Canola	plastid	22.61	23.62
CDX95305	Canola	plastid	22.61	23.62
CDY33993	Canola	plastid	21.11	23.53
CDY55175	Canola	cytosol	27.39	23.29
CDY14050	Canola	cytosol	26.88	22.86
CDX70028	Canola	cytosol	22.36	22.42
CDX86953	Canola	cytosol	26.38	22.01
CDY00231	Canola	cytosol	26.38	22.01
CDY05832	Canola	cytosol	25.63	20.4
CDX71683	Canola	cytosol	25.63	20.4
CDX98981	Canola	endoplasmic reticulum, golgi	21.11	19.72
CDY39471	Canola	cytosol	16.83	16.71

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078FF31	UniProt:A0A078FF31	EnsemblPlants:CDY11524	ProteinID:CDY11524
ProteinID:CDY11524.1	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00049606001	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF662
SUPFAM:SSF103506	UniParc:UPI0002542C98	SEG:seg	:	:	:

Description

BnaA09g40900DBnaA09g40900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FF31]

Coordinates

chrLK032011:-:800516..802401

Molecular Weight (calculated)

42904.1 Da

IEP (calculated)

9.591

GRAVY (calculated)

-0.017

Length

398 amino acids

Sequence
(BLAST)

001: MGKTGINLFD DTSNGFFSVS DLGSDWSLQN PTYRPVGGLF ASVNQLGAGF GSGLGSGSIP DPPNRDNSSF TAQLNDLCTK YSPFKEVEVE EEEVIGQKKK
101: KKGGFKLKLK ISNPALRRLF SGAVAGAVSR TAVAPLETIR THLMVGSGGE STTEVFRDIM KHEGWKGLFR GNLVNVIRVA PARAVELFVF ETVNKKLTPK
201: LGEDSKIPIP ASLLAGACAG VSQTLLTYPL ELVKTRLTIQ RGVYKGILDA FVKIIREEGP TELYRGLAPS LIGVVPYAAT NYFAYDSLRK AYRKMVKKES
301: IGNVETLLIG SLAGALSSTA TFPLEVARKH MQVGAVGGRA VYKNMLHALV CILEQEGLAG WYRGLGPSCL KLVPAAGISF MCYEACKKIL VENNNEDA

Best Arabidopsis Sequence Match ( AT4G32400.1 )
(BLAST)

001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA

Arabidopsis Description

BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.