Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007793.1-P | Field mustard | cytosol | 98.99 | 98.74 |
| CDY11524 | Canola | cytosol | 98.99 | 98.74 |
| CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 78.59 | 81.68 |
| CDX68841 | Canola | cytosol | 77.33 | 81.43 |
| CDX68843 | Canola | cytosol | 25.69 | 77.86 |
| KRH15889 | Soybean | endoplasmic reticulum | 44.08 | 73.22 |
| TraesCS7A01G495700.1 | Wheat | cytosol, plastid | 38.29 | 72.04 |
| PGSC0003DMT400053564 | Potato | cytosol, nucleus, plastid | 70.03 | 69.85 |
| Solyc08g061090.2.1 | Tomato | plastid | 69.77 | 69.6 |
| VIT_04s0008g05240.t01 | Wine grape | cytosol | 68.26 | 68.26 |
| KRH52458 | Soybean | extracellular | 66.25 | 67.26 |
| KRH61786 | Soybean | cytosol, nucleus, plastid | 66.0 | 67.01 |
| GSMUA_Achr7P10070_001 | Banana | cytosol | 61.21 | 62.95 |
| KRH05133 | Soybean | mitochondrion | 65.24 | 61.96 |
| Zm00001d009799_P001 | Maize | plastid | 62.72 | 61.33 |
| Os05t0171300-01 | Rice | mitochondrion, plastid | 62.72 | 60.0 |
| Zm00001d037640_P001 | Maize | plastid | 61.21 | 59.85 |
| GSMUA_Achr7P10000_001 | Banana | mitochondrion | 34.76 | 59.23 |
| GSMUA_Achr6P05150_001 | Banana | cytosol, plastid, vacuole | 59.7 | 58.96 |
| HORVU1Hr1G025480.1 | Barley | nucleus, peroxisome, vacuole | 60.96 | 58.6 |
| TraesCS1B01G135400.1 | Wheat | cytosol | 60.71 | 58.5 |
| EES17800 | Sorghum | cytosol | 61.71 | 58.47 |
| TraesCS1A01G115500.1 | Wheat | golgi | 60.71 | 58.35 |
| Os06t0602700-01 | Rice | plastid | 61.71 | 57.92 |
| TraesCS1D01G116900.1 | Wheat | cytosol | 60.45 | 57.83 |
| Zm00001d046400_P002 | Maize | mitochondrion | 60.96 | 57.62 |
| EER90006 | Sorghum | plastid | 60.96 | 57.48 |
| HORVU7Hr1G111040.2 | Barley | cytosol | 59.7 | 56.16 |
| TraesCS7B01G401600.1 | Wheat | cytosol | 59.95 | 56.13 |
| TraesCS7D01G483000.1 | Wheat | cytosol | 59.45 | 55.79 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 58.44 | 51.9 |
| TraesCS6B01G210000.1 | Wheat | plastid | 55.42 | 51.28 |
| TraesCS6D01G168200.1 | Wheat | golgi | 54.91 | 50.82 |
| TraesCS6A01G175100.1 | Wheat | plastid | 55.16 | 50.58 |
| Os02t0202400-01 | Rice | plastid | 53.9 | 50.35 |
| EES04720 | Sorghum | plastid | 53.15 | 48.51 |
| Zm00001d015746_P001 | Maize | plastid | 52.14 | 47.37 |
| CDX82257 | Canola | cytosol | 30.98 | 35.34 |
| CDY29805 | Canola | cytosol | 30.98 | 35.34 |
| CDY25400 | Canola | cytosol, plastid | 30.98 | 35.34 |
| CDY36050 | Canola | cytosol, plastid | 30.48 | 34.77 |
| CDY01954 | Canola | mitochondrion | 16.12 | 32.49 |
| CDY11371 | Canola | cytosol | 27.71 | 32.45 |
| CDX71722 | Canola | cytosol | 27.46 | 32.25 |
| CDX74363 | Canola | cytosol | 28.46 | 32.01 |
| CDX91877 | Canola | cytosol | 28.46 | 32.01 |
| CDY07175 | Canola | cytosol | 28.21 | 32.0 |
| CDY48505 | Canola | cytosol | 28.21 | 32.0 |
| CDX70930 | Canola | cytosol | 15.37 | 31.44 |
| CDY68466 | Canola | cytosol | 25.69 | 30.63 |
| CDY66909 | Canola | cytosol, mitochondrion, plastid | 9.32 | 30.33 |
| CDY07764 | Canola | plastid | 25.94 | 30.29 |
| CDY59491 | Canola | cytosol | 25.94 | 30.29 |
| CDX94361 | Canola | cytosol | 25.44 | 30.24 |
| CDY40244 | Canola | plastid | 25.19 | 29.85 |
| CDX96850 | Canola | cytosol | 24.69 | 29.61 |
| CDY18420 | Canola | plastid | 25.69 | 29.57 |
| CDX84024 | Canola | cytosol | 24.43 | 29.48 |
| CDX93344 | Canola | plastid | 25.44 | 29.28 |
| CDY13155 | Canola | cytosol | 25.69 | 29.14 |
| CDX76183 | Canola | cytosol | 25.44 | 28.86 |
| CDY56673 | Canola | cytosol | 24.43 | 28.61 |
| CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 23.17 | 28.13 |
| CDY19928 | Canola | cytosol | 23.17 | 27.46 |
| CDY41199 | Canola | plastid | 24.69 | 27.22 |
| CDX85385 | Canola | cytosol | 22.42 | 26.41 |
| CDX86261 | Canola | cytosol | 22.42 | 26.41 |
| CDY31292 | Canola | cytosol | 23.17 | 26.29 |
| CDX68026 | Canola | plastid | 26.2 | 26.2 |
| CDY14527 | Canola | plastid | 27.46 | 26.14 |
| CDX79251 | Canola | plastid | 26.2 | 26.13 |
| CDY08834 | Canola | plastid | 27.2 | 25.84 |
| CDX97455 | Canola | plastid | 9.82 | 25.83 |
| CDY67915 | Canola | cytosol | 16.37 | 25.79 |
| CDX80771 | Canola | cytosol, plastid | 25.19 | 24.75 |
| CDY11199 | Canola | plastid | 25.19 | 24.69 |
| CDX95305 | Canola | plastid | 22.67 | 23.62 |
| CDY23168 | Canola | plastid | 22.67 | 23.62 |
| CDY33993 | Canola | plastid | 21.16 | 23.53 |
| CDY55175 | Canola | cytosol | 27.46 | 23.29 |
| CDY14050 | Canola | cytosol | 26.95 | 22.86 |
| CDX70028 | Canola | cytosol | 22.42 | 22.42 |
| CDX86953 | Canola | cytosol | 26.45 | 22.01 |
| CDY00231 | Canola | cytosol | 26.45 | 22.01 |
| CDY05832 | Canola | cytosol | 25.69 | 20.4 |
| CDX71683 | Canola | cytosol | 25.69 | 20.4 |
| CDX98981 | Canola | endoplasmic reticulum, golgi | 21.16 | 19.72 |
| CDY39471 | Canola | cytosol | 16.62 | 16.46 |
Protein Annotations
| EnsemblPlants:CDX76755 | EnsemblPlantsGene:GSBRNA2T00127247001 | Gene3D:1.50.40.10 | GO:A0A078CIN7 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0055085 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
| PANTHER:PTHR24089 | PANTHER:PTHR24089:SF662 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | ProteinID:CDX76755 |
| ProteinID:CDX76755.1 | SEG:seg | SUPFAM:SSF103506 | UniParc:UPI0004EE37A9 | MapMan:24.2.13 | : |
Description
BnaC08g33410D
Coordinates
chrLK031808:-:857716..859657
Molecular Weight (calculated)
42849.1 Da
IEP (calculated)
9.488
GRAVY (calculated)
0.004
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTGINLFD DTSNGFFSVS DLGSDWSLQN PNYRPVGGLF ASVNQLGAGF GSGLGSGSIP DPPNRDNSSF TAQLNDLCTK YLPFKEVEVE EEEVIGQKKK
101: KGGFKLKLKI SNPALRRLFS GAVAGAVSRT AVAPLETIRT HLMVGSGGES TTEVFRDIMK HEGWKGLFRG NLVNVIRVAP ARAVELFVFE TVNKKLTLKL
201: GEDSKIPIPA SLLAGACAGV SQTLLTYPLE LVKTRLTIQR GVYKGILDAF VKIMREEGPT ELYRGLAPSL IGVVPYAATN YFAYDSLRKA YRKMVKKESI
301: GNVETLLIGS LAGALSSTAT FPLEVARKHM QVGAVGGRAV YKNMLHALVC ILEQEGLAGW YRGLGPSCLK LVPAAGISFM CYEACKKILV ENNNEDA
101: KGGFKLKLKI SNPALRRLFS GAVAGAVSRT AVAPLETIRT HLMVGSGGES TTEVFRDIMK HEGWKGLFRG NLVNVIRVAP ARAVELFVFE TVNKKLTLKL
201: GEDSKIPIPA SLLAGACAGV SQTLLTYPLE LVKTRLTIQR GVYKGILDAF VKIMREEGPT ELYRGLAPSL IGVVPYAATN YFAYDSLRKA YRKMVKKESI
301: GNVETLLIGS LAGALSSTAT FPLEVARKHM QVGAVGGRAV YKNMLHALVC ILEQEGLAGW YRGLGPSCLK LVPAAGISFM CYEACKKILV ENNNEDA
001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
Arabidopsis Description
BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.