Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G483000.1 | Wheat | cytosol | 97.88 | 98.11 |
| TraesCS7A01G495700.1 | Wheat | cytosol, plastid | 48.58 | 97.63 |
| HORVU7Hr1G111040.2 | Barley | cytosol | 96.7 | 97.16 |
| Os06t0602700-01 | Rice | plastid | 88.68 | 88.89 |
| Zm00001d046400_P002 | Maize | mitochondrion | 83.96 | 84.76 |
| EER90006 | Sorghum | plastid | 83.25 | 83.85 |
| KRH15889 | Soybean | endoplasmic reticulum | 41.27 | 73.22 |
| GSMUA_Achr7P10070_001 | Banana | cytosol | 63.21 | 69.43 |
| TraesCS1B01G135400.1 | Wheat | cytosol | 65.33 | 67.23 |
| CDX68843 | Canola | cytosol | 20.75 | 67.18 |
| GSMUA_Achr7P10000_001 | Banana | mitochondrion | 36.56 | 66.52 |
| GSMUA_Achr6P05150_001 | Banana | cytosol, plastid, vacuole | 62.5 | 65.92 |
| VIT_04s0008g05240.t01 | Wine grape | cytosol | 60.38 | 64.48 |
| PGSC0003DMT400053564 | Potato | cytosol, nucleus, plastid | 59.91 | 63.82 |
| Solyc08g061090.2.1 | Tomato | plastid | 59.43 | 63.32 |
| CDX68841 | Canola | cytosol | 54.72 | 61.54 |
| KRH52458 | Soybean | extracellular | 56.37 | 61.13 |
| KRH61786 | Soybean | cytosol, nucleus, plastid | 56.13 | 60.87 |
| VIT_11s0016g05110.t01 | Wine grape | cytosol | 57.31 | 60.75 |
| Bra007793.1-P | Field mustard | cytosol | 56.6 | 60.3 |
| CDY11524 | Canola | cytosol | 56.6 | 60.3 |
| Bra011344.1-P | Field mustard | cytosol | 54.25 | 60.21 |
| CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 54.25 | 60.21 |
| AT4G32400.1 | Thale cress | cytosol | 55.66 | 60.2 |
| KRH03708 | Soybean | cytosol, mitochondrion, nucleus, plastid | 58.02 | 60.15 |
| CDX76755 | Canola | cytosol | 56.13 | 59.95 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 61.08 | 57.94 |
| TraesCS6B01G210000.1 | Wheat | plastid | 58.02 | 57.34 |
| KRH05133 | Soybean | mitochondrion | 55.19 | 55.98 |
| TraesCS5B01G274300.1 | Wheat | cytosol | 29.72 | 32.73 |
| TraesCS7B01G138400.1 | Wheat | cytosol | 28.54 | 32.53 |
| TraesCS1B01G459400.1 | Wheat | cytosol | 23.82 | 28.53 |
| TraesCS6B01G231800.3 | Wheat | cytosol | 21.93 | 27.76 |
| TraesCS3B01G070700.1 | Wheat | cytosol, mitochondrion, peroxisome | 21.23 | 27.36 |
| TraesCS5B01G299100.1 | Wheat | plastid | 20.28 | 27.04 |
| TraesCS4B01G211000.1 | Wheat | plastid | 21.23 | 26.87 |
| TraesCS3B01G238400.1 | Wheat | cytosol, plastid, vacuole | 14.86 | 26.58 |
| TraesCS4B01G306400.1 | Wheat | peroxisome | 25.71 | 25.95 |
| TraesCS3B01G280800.1 | Wheat | cytosol, mitochondrion, plastid | 19.34 | 24.33 |
| TraesCS3B01G493000.1 | Wheat | cytosol | 22.64 | 23.7 |
| TraesCS3B01G211500.1 | Wheat | golgi | 21.23 | 23.14 |
| TraesCS7B01G278000.1 | Wheat | cytosol, plastid | 26.65 | 21.94 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G401600.1 | EnsemblPlantsGene:TraesCS7B01G401600 | Gene3D:1.50.40.10 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF358 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | SEG:seg | SUPFAM:SSF103506 |
| MapMan:24.2.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:667777711..667780018
Molecular Weight (calculated)
45855.0 Da
IEP (calculated)
9.461
GRAVY (calculated)
0.043
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTMMAVTA KSKNCTLASE KKHGWAIPPL PELRFPWDLQ EDKGHKAFSL SLHDSASPHG GLFASVGLKV STPAPAVSTS PAEQEFKIPF ADHCIKYVSS
101: AVGFPVVGAV AESVEEEVVV DGKIIRKKAK KRGLKLKIKI GNPHLRRLVS GAIAGAVSRT CVAPLETIRT HLMVGSNGDS MTEVFQTIMK SEGWTGLFRG
201: NFVNVIRVAP SKAIELFAFD TAKKFLTPKA DESSKTPFPP SLVAGALAGV SSTLCTYPLE LIKTRLTIEK DVYDNFLHCL VKIVREEGPS ELYRGLTPSL
301: IGVVPYAATN YYAYDTLRKL YRKTFKQEEI SNIATLLIGS AAGAISSTAT FPLEVARKQM QAGAVGGRQV YKNVFHALYC IMEKEGIGGL YKGLGPSCIK
401: LMPAAGISFM CYEACKKILV EAEE
101: AVGFPVVGAV AESVEEEVVV DGKIIRKKAK KRGLKLKIKI GNPHLRRLVS GAIAGAVSRT CVAPLETIRT HLMVGSNGDS MTEVFQTIMK SEGWTGLFRG
201: NFVNVIRVAP SKAIELFAFD TAKKFLTPKA DESSKTPFPP SLVAGALAGV SSTLCTYPLE LIKTRLTIEK DVYDNFLHCL VKIVREEGPS ELYRGLTPSL
301: IGVVPYAATN YYAYDTLRKL YRKTFKQEEI SNIATLLIGS AAGAISSTAT FPLEVARKQM QAGAVGGRQV YKNVFHALYC IMEKEGIGGL YKGLGPSCIK
401: LMPAAGISFM CYEACKKILV EAEE
001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
Arabidopsis Description
BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.