Factsheet for Bra011344.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75241	Canola	cytoskeleton, cytosol, nucleus	99.74	99.74
CDX68841	Canola	cytosol	94.76	96.02
AT4G32400.1	Thale cress	cytosol	89.53	87.24
CDX68843	Canola	cytosol	29.84	87.02
Bra007793.1-P	Field mustard	cytosol	81.94	78.64
KRH15889	Soybean	endoplasmic reticulum	46.6	74.48
TraesCS7A01G495700.1	Wheat	cytosol, plastid	38.48	69.67
VIT_04s0008g05240.t01	Wine grape	cytosol	70.16	67.51
Solyc08g061090.2.1	Tomato	plastid	70.16	67.34
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	69.63	66.83
KRH52458	Soybean	extracellular	67.28	65.73
KRH61786	Soybean	cytosol, nucleus, plastid	66.23	64.71
KRH05133	Soybean	mitochondrion	66.75	61.0
GSMUA_Achr7P10070_001	Banana	cytosol	60.99	60.36
Zm00001d009799_P001	Maize	plastid	62.04	58.37
Os05t0171300-01	Rice	mitochondrion, plastid	62.57	57.59
Zm00001d037640_P001	Maize	plastid	60.99	57.39
HORVU1Hr1G025480.1	Barley	nucleus, peroxisome, vacuole	61.78	57.14
TraesCS1A01G115500.1	Wheat	golgi	61.26	56.66
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	59.16	56.22
TraesCS1B01G135400.1	Wheat	cytosol	60.47	56.07
TraesCS1D01G116900.1	Wheat	cytosol	60.73	55.9
EES17800	Sorghum	cytosol	60.99	55.61
Os06t0602700-01	Rice	plastid	61.52	55.56
Zm00001d046400_P002	Maize	mitochondrion	59.95	54.52
EER90006	Sorghum	plastid	59.95	54.39
TraesCS7D01G483000.1	Wheat	cytosol	60.21	54.37
TraesCS7B01G401600.1	Wheat	cytosol	60.21	54.25
GSMUA_Achr7P10000_001	Banana	mitochondrion	32.98	54.08
HORVU7Hr1G111040.2	Barley	cytosol	59.69	54.03
GSMUA_Achr10P...	Banana	endoplasmic reticulum	59.16	50.56
Os02t0202400-01	Rice	plastid	56.02	50.35
TraesCS6B01G210000.1	Wheat	plastid	56.02	49.88
TraesCS6D01G168200.1	Wheat	golgi	55.5	49.42
TraesCS6A01G175100.1	Wheat	plastid	55.76	49.19
EES04720	Sorghum	plastid	53.93	47.36
Zm00001d015746_P001	Maize	plastid	52.88	46.22
Bra035801.1-P	Field mustard	cytosol	31.15	34.2
Bra037383.1-P	Field mustard	cytosol	30.1	32.86
Bra007623.1-P	Field mustard	cytosol	28.8	32.45
Bra000944.1-P	Field mustard	cytosol	29.58	32.01
Bra031891.1-P	Field mustard	cytosol	22.25	31.48
Bra001780.1-P	Field mustard	cytosol	21.99	30.55
Bra000026.1-P	Field mustard	plastid	26.96	30.29
Bra026457.1-P	Field mustard	cytosol	26.18	29.94
Bra017151.1-P	Field mustard	plastid	26.44	29.28
Bra016697.1-P	Field mustard	cytosol	24.87	28.7
Bra026206.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	24.35	28.44
Bra036153.1-P	Field mustard	cytosol	24.61	28.06
Bra014855.1-P	Field mustard	cytosol	25.92	27.65
Bra007181.1-P	Field mustard	plastid	25.39	27.25
Bra003653.1-P	Field mustard	plastid	27.75	26.7
Bra024342.1-P	Field mustard	plastid	28.27	25.84
Bra005684.1-P	Field mustard	plastid	25.65	24.26
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	19.11	23.78
Bra033473.1-P	Field mustard	plastid	23.3	23.36
Bra028702.1-P	Field mustard	cytosol	27.23	22.22
Bra019615.1-P	Field mustard	cytosol	26.18	20.96
Bra009271.1-P	Field mustard	cytosol	23.56	20.88
Bra035722.1-P	Field mustard	cytosol	26.44	20.24

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EnsemblPlantsGene:Bra011344	EnsemblPlants:Bra011344.1	EnsemblPlants:Bra011344.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006810	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009941	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	UniProt:M4D4E0	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF662	SUPFAM:SSF103506
UniParc:UPI0002546438	SEG:seg	:	:	:	:

Description

AT4G32400 (E=2e-144) SHS1, ATBT1 | SHS1 (SODIUM HYPERSENSITIVE 1); binding / nucleotide transmembrane transporter/ transporter

Coordinates

chrA01:-:2646022..2647523

Molecular Weight (calculated)

41086.9 Da

IEP (calculated)

9.664

GRAVY (calculated)

0.027

Length

382 amino acids

Sequence
(BLAST)

001: MVKTGIQLFD DSRNGLFSVS DLGCDRSLTG VNHHHHTIGA LFASVNQTNP FGSGSIPSNA SLSAQLNGKV EEWEELVNGE KKKKNGGGMK LKIKIGNPSL
101: RRLISGAVAG AVSRTVVAPL ETIRTHLMVG SGGNSSAEVF GDIMKHEGWT GLFRGNLVNV IRVAPARAVE LFVFETVNKK LSPEHGEQSK IPIPASLLAG
201: ACAGVSQTLL TYPLELVKTR LTIQRGVYKG IFDAFVKIIR EEGPTELYRG LAPSLIGVVP YAATNYFAYD SLRKAYRSFS KQEKIGNIET LLIGSLAGAL
301: SSTATFPLEV ARKHMQVGAV SGRVVYKNML DALVSILEHE GILGWYKGLG PSCLKLVPAA GISFMCYEAC KKILVENNNQ EA

Best Arabidopsis Sequence Match ( AT4G32400.1 )
(BLAST)

001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA

Arabidopsis Description

BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.