CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 2
nucleus 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52458	Soybean	extracellular	94.88	94.88
KRH15889	Soybean	endoplasmic reticulum	48.34	79.08
TraesCS7A01G495700.1	Wheat	cytosol, plastid	38.62	71.56
VIT_04s0008g05240.t01	Wine grape	cytosol	72.38	71.28
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	70.84	69.6
Solyc08g061090.2.1	Tomato	plastid	70.33	69.1
CDX68841	Canola	cytosol	65.22	67.64
Bra007793.1-P	Field mustard	cytosol	67.77	66.58
CDY11524	Canola	cytosol	67.77	66.58
AT4G32400.1	Thale cress	cytosol	66.75	66.58
KRH05133	Soybean	mitochondrion	71.1	66.51
CDX75241	Canola	cytoskeleton, cytosol, nucleus	64.71	66.23
Bra011344.1-P	Field mustard	cytosol	64.71	66.23
CDX76755	Canola	cytosol	67.01	66.0
CDX68843	Canola	cytosol	21.99	65.65
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	66.24	63.33
GSMUA_Achr7P10070_001	Banana	cytosol	60.36	61.14
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	59.59	57.96
GSMUA_Achr7P10000_001	Banana	mitochondrion	34.53	57.94
Os06t0602700-01	Rice	plastid	62.4	57.68
Zm00001d009799_P001	Maize	plastid	59.34	57.14
Zm00001d046400_P002	Maize	mitochondrion	61.13	56.9
TraesCS7D01G483000.1	Wheat	cytosol	61.13	56.5
Zm00001d037640_P001	Maize	plastid	58.57	56.4
EER90006	Sorghum	plastid	60.61	56.29
Os05t0171300-01	Rice	mitochondrion, plastid	59.59	56.14
TraesCS7B01G401600.1	Wheat	cytosol	60.87	56.13
HORVU7Hr1G111040.2	Barley	cytosol	60.36	55.92
HORVU1Hr1G025480.1	Barley	nucleus, peroxisome, vacuole	58.82	55.69
TraesCS1A01G115500.1	Wheat	golgi	58.57	55.45
EES17800	Sorghum	cytosol	59.34	55.37
TraesCS1B01G135400.1	Wheat	cytosol	58.06	55.1
TraesCS1D01G116900.1	Wheat	cytosol	58.31	54.94
TraesCS6B01G210000.1	Wheat	plastid	54.99	50.12
TraesCS6D01G168200.1	Wheat	golgi	54.48	49.65
Os02t0202400-01	Rice	plastid	53.96	49.65
TraesCS6A01G175100.1	Wheat	plastid	54.73	49.42
GSMUA_Achr10P...	Banana	endoplasmic reticulum	56.01	48.99
Zm00001d015746_P001	Maize	plastid	53.96	48.28
EES04720	Sorghum	plastid	53.45	48.05
KRH27854	Soybean	cytosol	27.62	32.73
KRH77631	Soybean	cytosol	27.62	32.73
KRG97138	Soybean	cytosol	28.13	31.88
KRH68888	Soybean	cytosol	27.88	31.59
KRH49196	Soybean	endoplasmic reticulum	21.99	31.27
KRH47947	Soybean	mitochondrion	28.13	30.99
KRH46981	Soybean	plastid	30.18	30.97
KRH44680	Soybean	extracellular	29.92	30.95
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	26.09	30.63
KRH06509	Soybean	cytosol	27.62	30.42
KRH75891	Soybean	cytosol, peroxisome	14.58	29.53
KRH00061	Soybean	cytosol	25.06	29.52
KRH15037	Soybean	cytosol	24.55	29.45
KRH73096	Soybean	cytosol	24.04	28.75
KRH49045	Soybean	cytosol	23.27	28.17
KRH62352	Soybean	cytosol, peroxisome, plastid	29.92	28.12
KRH43178	Soybean	plastid	29.41	27.71
KRH53070	Soybean	cytosol, peroxisome, plasma membrane	29.41	27.64
KRH52207	Soybean	cytosol	23.02	26.63
KRH61524	Soybean	cytosol	23.02	26.55
KRH02242	Soybean	cytosol	21.48	25.69
KRH49367	Soybean	plastid	25.06	25.65
KRH50868	Soybean	cytosol	20.97	24.77
KRH65751	Soybean	plastid	24.3	24.74
KRH37122	Soybean	cytosol	20.72	24.7
KRH12112	Soybean	cytosol	20.72	24.7
KRH00225	Soybean	cytosol, endoplasmic reticulum, peroxisome	19.69	24.29
KRH63894	Soybean	cytosol	28.13	23.5
KRH54061	Soybean	cytosol	28.13	23.11
KRG94737	Soybean	cytosol	28.13	23.06
KRH06795	Soybean	cytosol	27.62	22.83
KRH41046	Soybean	cytosol	27.88	22.15
KRH70079	Soybean	cytosol	27.37	22.15
KRH59718	Soybean	cytosol	28.13	22.0

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100810035	MapMan:24.2.13	EMBL:ACUP02002189	ncoils:Coil	EnsemblPlantsGene:GLYMA_04G067800
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:I1JUD9	InterPro:IPR018108	InterPro:IPR023395
EnsemblPlants:KRH61786	ProteinID:KRH61786	ProteinID:KRH61786.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF662	SUPFAM:SSF103506
UniParc:UPI000233A7EE	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:5679960..5684673

Molecular Weight (calculated)

42473.6 Da

IEP (calculated)

9.595

GRAVY (calculated)

-0.048

Length

391 amino acids

Sequence
(BLAST)

001: MGRRGIQLFD EKIDVFFSVS NLGFESKDGY HQFGGLFASV GQMGMGVGVQ PNDPSDSRDN GGMKLPLNEL FLKHVQPQGK EEVVEEGAKG KKNRKGGGVS
101: LKLKIRNPSL RRLFSGAVAG AVSRTAVAPL ETIRTLLMVG SSGHSTTEVF NNIMKTDGWK GLFRGNFVNV IRVAPSKAIE LFAFDTVNKN LSPKPGEQSK
201: IPIPASLIAG ACAGISSTIC TYPLELVKTR LTVQSDIYHG LLHAFVKIIR EEGPAQLYRG LAASLIGVVP YAATNYYAYD TLRKAYQKIF KEEKVGNIET
301: LLIGSVAGAF SSSATFPLEV ARKQMQLGAL SGRQVYKNVF HALACIFEQE GIHGLYRGLA PSCMKLVPAA GISFMCYEAL KRILLENDEE D

Best Arabidopsis Sequence Match ( AT4G32400.1 )
(BLAST)

001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA

Arabidopsis Description

BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.