CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

extracellular: 25724908

msms PMID: 25724908 doi

VC Clarke, PC Loughlin, A Gavrin, C Chen, EM Brear, DA Day, PM Smith

From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46981	Soybean	plastid	94.71	93.96
VIT_09s0054g00790.t01	Wine grape	cytosol	69.31	73.6
HORVU5Hr1G074710.1	Barley	mitochondrion	59.26	70.89
PGSC0003DMT400023766	Potato	cytosol	64.81	69.21
AT3G20240.1	Thale cress	cytosol	62.7	68.1
Bra035801.1-P	Field mustard	cytosol	62.43	67.82
CDY25400	Canola	cytosol, plastid	62.43	67.82
CDX82257	Canola	cytosol	62.17	67.53
CDY29805	Canola	cytosol	62.17	67.53
CDY36050	Canola	cytosol, plastid	61.38	66.67
GSMUA_Achr6P30940_001	Banana	cytosol	63.23	66.57
Solyc03g123990.2.1	Tomato	cytosol	64.55	66.48
GSMUA_Achr6P03740_001	Banana	cytosol	60.32	62.98
Bra001780.1-P	Field mustard	cytosol	45.24	62.18
Zm00001d020980_P001	Maize	cytosol	61.38	62.03
EER96987	Sorghum	cytosol	61.38	61.87
EER97679	Sorghum	cytosol	60.05	61.85
Os08t0520000-01	Rice	cytosol	61.9	60.78
TraesCS5B01G274300.1	Wheat	cytosol	61.64	60.52
TraesCS5A01G274600.1	Wheat	cytosol, plastid	61.11	60.31
Zm00001d031527_P001	Maize	cytosol	60.58	60.26
TraesCS5D01G282200.1	Wheat	cytosol	60.85	60.05
EES15354	Sorghum	cytosol	60.58	59.95
TraesCS7B01G138400.1	Wheat	cytosol	58.99	59.95
HORVU5Hr1G074670.1	Barley	mitochondrion	61.11	59.69
TraesCS7D01G250600.1	Wheat	cytosol	56.88	59.07
TraesCS7A01G252500.1	Wheat	cytosol	57.41	58.97
Os09t0497000-01	Rice	plastid	60.58	58.57
Zm00001d022406_P002	Maize	cytosol	59.79	58.4
KRH15889	Soybean	endoplasmic reticulum	25.66	40.59
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	33.86	31.3
KRH61786	Soybean	cytosol, nucleus, plastid	30.95	29.92
KRH05133	Soybean	mitochondrion	33.07	29.9
KRH52458	Soybean	extracellular	30.42	29.41
KRH52207	Soybean	cytosol	23.02	25.74
KRH02242	Soybean	cytosol	22.22	25.69
KRH61524	Soybean	cytosol	22.75	25.37
KRH50868	Soybean	cytosol	21.69	24.77
KRH12112	Soybean	cytosol	21.43	24.7
KRH37122	Soybean	cytosol	20.9	24.09
KRH75891	Soybean	cytosol, peroxisome	11.9	23.32
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	20.11	22.82
KRH77631	Soybean	cytosol	19.84	22.73
KRH27854	Soybean	cytosol	19.58	22.42
KRH49045	Soybean	cytosol	19.05	22.29
KRG97138	Soybean	cytosol	20.11	22.03
KRH49196	Soybean	endoplasmic reticulum	15.87	21.82
KRH68888	Soybean	cytosol	19.84	21.74
KRH49367	Soybean	plastid	21.96	21.73
KRH53070	Soybean	cytosol, peroxisome, plasma membrane	23.02	20.91
KRH15037	Soybean	cytosol	17.99	20.86
KRH47947	Soybean	mitochondrion	19.58	20.85
KRH65751	Soybean	plastid	21.16	20.83
KRH62352	Soybean	cytosol, peroxisome, plastid	22.75	20.67
KRH06509	Soybean	cytosol	19.31	20.56
KRH00225	Soybean	cytosol, endoplasmic reticulum, peroxisome	16.93	20.19
KRH73096	Soybean	cytosol	17.46	20.18
KRH00061	Soybean	cytosol	17.46	19.88
KRH43178	Soybean	plastid	21.69	19.76
KRH06795	Soybean	cytosol	20.9	16.7
KRG94737	Soybean	cytosol	20.9	16.56
KRH59718	Soybean	cytosol	21.69	16.4
KRH41046	Soybean	cytosol	21.16	16.26
KRH54061	Soybean	cytosol	20.37	16.18
KRH63894	Soybean	cytosol	19.58	15.81
KRH70079	Soybean	cytosol	20.11	15.73

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100777341	MapMan:24.2.13	EMBL:ACUP02004947	EnsemblPlantsGene:GLYMA_08G225000	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	UniProt:I1KVU6	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KRH44680
ProteinID:KRH44680	ProteinID:KRH44680.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF405	SUPFAM:SSF103506	TMHMM:TMhelix
UniParc:UPI00023C61D7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:18231522..18234013

Molecular Weight (calculated)

41402.4 Da

IEP (calculated)

8.793

GRAVY (calculated)

-0.008

Length

378 amino acids

Sequence
(BLAST)

001: MSSSNSKTKT PSSLSLCNSK PQPQEGNMAL ESQPQKNKYG HGVFGDVYSI IKEMEIDHHN NSTFDFQFPP ITNFLGSREV REFISGALSG AMTKAILAPL
101: ETIRTRMVVG VGSKNIAGSF IEVIEQQGWQ GLWAGNMINM LRIVPTQAIE LGTFECVKRA MTSLHEKWES NEYPKLQIGP INFNLSLSWI SPVAIAGAAA
201: GIASTLVCHP LEVLKDRLTV SPETYPSLGI AIRNIYKDGG VGAFYAGISP TLVGMLPYST CFYFMYDTIK ESYCRTKSKK SLSRPEMLLI GALAGFTAST
301: ISFPLEVARK RLMVGALQGK CPPNMAAALS EVIREEGLKG LYRGWGASCL KVMPSSGITW MFYEAWKDIL LVQNGNPL

Best Arabidopsis Sequence Match ( AT3G20240.1 )
(BLAST)

001: MAMVVPKEGL VVMDKESVSS ASSDSHLRLQ PHFPDFTIPV KDFFKSREAR EFLSGALAGA MTKAVLAPLE TIRTRMIVGV GSRSIPGSFL EVVQKQGWQG
101: LWAGNEINMI RIIPTQAIEL GTFEWVKRAM TSAQVKLKKI EDAKIEIGDF SFSPSISWIS PVAVAGASAG IASTLVCHPL EVLKDRLTVS PEIYPSLSLA
201: IPRIFRADGI RGFYAGLGPT LVGMLPYSTC YYFMYDKMKT SYCKSKNKKA LSRPEMLVLG ALAGLTASTI SFPLEVARKR LMVGALKGEC PPNMAAAIAE
301: VVKKEGVMGL YRGWGASCLK VMPSSGITWV FYEAWKDILL AANTKPLI

Arabidopsis Description

Probable mitochondrial adenine nucleotide transporter BTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.