CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020980_P001	Maize	cytosol	93.6	93.85
EER97679	Sorghum	cytosol	85.87	87.74
HORVU5Hr1G074710.1	Barley	mitochondrion	70.4	83.54
Os09t0497000-01	Rice	plastid	85.6	82.1
TraesCS5B01G274300.1	Wheat	cytosol	83.47	81.3
TraesCS5A01G274600.1	Wheat	cytosol, plastid	82.67	80.94
TraesCS5D01G282200.1	Wheat	cytosol	82.4	80.68
HORVU5Hr1G074670.1	Barley	mitochondrion	80.27	77.78
EES15354	Sorghum	cytosol	74.93	73.56
PGSC0003DMT400023766	Potato	cytosol	65.07	68.93
GSMUA_Achr6P30940_001	Banana	cytosol	64.8	67.69
VIT_09s0054g00790.t01	Wine grape	cytosol	62.93	66.29
Solyc03g123990.2.1	Tomato	cytosol	64.53	65.94
Bra035801.1-P	Field mustard	cytosol	60.8	65.52
CDY25400	Canola	cytosol, plastid	60.8	65.52
CDY29805	Canola	cytosol	60.53	65.23
AT3G20240.1	Thale cress	cytosol	60.27	64.94
GSMUA_Achr6P03740_001	Banana	cytosol	62.4	64.64
CDX82257	Canola	cytosol	59.2	63.79
CDY36050	Canola	cytosol, plastid	58.4	62.93
KRH44680	Soybean	extracellular	61.87	61.38
KRH46981	Soybean	plastid	60.0	59.06
Bra001780.1-P	Field mustard	cytosol	42.4	57.82
EER90006	Sorghum	plastid	34.93	31.12
EES17800	Sorghum	cytosol	34.4	30.79
EES04720	Sorghum	plastid	34.93	30.11
EES01355	Sorghum	extracellular	22.4	25.0
EES00940	Sorghum	plastid	22.67	25.0
KXG34072	Sorghum	cytosol	22.67	24.78
EES00336	Sorghum	cytosol	21.07	23.94
OQU92863	Sorghum	cytosol	21.6	23.41
KXG29836	Sorghum	cytosol, mitochondrion, plastid	20.53	22.92
EES20024	Sorghum	cytosol	21.6	22.82
EES02734	Sorghum	mitochondrion	22.4	21.0
KXG39987	Sorghum	peroxisome	21.33	18.65
OQU92679	Sorghum	cytosol	5.6	16.94
KXG29744	Sorghum	plastid	22.67	16.1
EER88619	Sorghum	cytosol, plastid	22.13	16.02

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EntrezGene:8054754	UniProt:C5X4J8	EnsemblPlants:EER96987	ProteinID:EER96987
ProteinID:EER96987.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF405	EnsemblPlantsGene:SORBI_3002G252500	SUPFAM:SSF103506	unigene:Sbi.1690	TMHMM:TMhelix
UniParc:UPI0001A8380F	RefSeq:XP_002460466.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:63909138..63914489

Molecular Weight (calculated)

40115.2 Da

IEP (calculated)

9.017

GRAVY (calculated)

0.169

Length

375 amino acids

Sequence
(BLAST)

001: MGYQDASRGG GKLSLASVGF AGPGAGAGGG GGYKELLVMA LPTDDGLDGA KVAEAIGVRL PDVGGAVRTI LESREAREFA SGALAGAMSK AILAPLETIR
101: TRMVVGVGSR HIFGSLVEII GQNGWQGLWA GNTINMLRII PTQAVELGTF ECVKRSMTEA QEKWKEDGCP KIQLGNLKIE LPLHFLSPVA IAGAAAGIAG
201: TLACHPLEVI KDRLTINREV YPSISLAFSK IYRTDGIRGL YAGLCPTLIG MLPYSTCYFF MYDTIKTSYC RLHKKSSLSR PELLVIGALS GLTASTISFP
301: LEVARKRLMV GALQGKCPPN MIAALSEVIR EEGFLGLYRG WGASCLKVMP NSGITWVFYE TWKDILLADR DKPRA

Best Arabidopsis Sequence Match ( AT3G20240.1 )
(BLAST)

001: MAMVVPKEGL VVMDKESVSS ASSDSHLRLQ PHFPDFTIPV KDFFKSREAR EFLSGALAGA MTKAVLAPLE TIRTRMIVGV GSRSIPGSFL EVVQKQGWQG
101: LWAGNEINMI RIIPTQAIEL GTFEWVKRAM TSAQVKLKKI EDAKIEIGDF SFSPSISWIS PVAVAGASAG IASTLVCHPL EVLKDRLTVS PEIYPSLSLA
201: IPRIFRADGI RGFYAGLGPT LVGMLPYSTC YYFMYDKMKT SYCKSKNKKA LSRPEMLVLG ALAGLTASTI SFPLEVARKR LMVGALKGEC PPNMAAAIAE
301: VVKKEGVMGL YRGWGASCLK VMPSSGITWV FYEAWKDILL AANTKPLI

Arabidopsis Description

Probable mitochondrial adenine nucleotide transporter BTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.