CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040351_P005	Maize	mitochondrion	93.75	92.36
Zm00001d049104_P001	Maize	cytosol, mitochondrion, plastid	43.75	92.11
Os01t0265200-01	Rice	plastid	75.75	79.53
TraesCS3B01G211500.1	Wheat	golgi	77.25	79.43
TraesCS3A01G181500.1	Wheat	golgi	77.25	78.83
TraesCS3D01G186300.1	Wheat	mitochondrion	77.0	78.57
HORVU3Hr1G037170.3	Barley	plastid	77.5	73.11
KRH75891	Soybean	cytosol, peroxisome	34.5	71.5
GSMUA_Achr11P...	Banana	extracellular	17.5	69.31
GSMUA_Achr9P03630_001	Banana	mitochondrion	63.25	67.11
VIT_08s0007g02230.t01	Wine grape	cytosol, mitochondrion, plastid	60.75	63.78
KRH65751	Soybean	plastid	60.0	62.5
GSMUA_Achr11P...	Banana	cytosol	19.5	61.9
PGSC0003DMT400030778	Potato	cytosol, peroxisome, plastid	58.25	61.32
Solyc09g005250.2.1	Tomato	plastid	58.0	61.05
KRH49367	Soybean	plastid	57.5	60.21
Bra033473.1-P	Field mustard	plastid	55.5	58.27
CDY23168	Canola	plastid	55.5	58.27
AT3G51870.1	Thale cress	plastid	55.25	58.01
CDX95305	Canola	plastid	55.25	58.01
KRH00225	Soybean	cytosol, endoplasmic reticulum, peroxisome	41.25	52.05
EES00940	Sorghum	plastid	26.0	30.59
EES01355	Sorghum	extracellular	24.75	29.46
KXG29836	Sorghum	cytosol, mitochondrion, plastid	24.75	29.46
EES20024	Sorghum	cytosol	25.5	28.73
EES00336	Sorghum	cytosol	23.25	28.18
OQU92679	Sorghum	cytosol	8.5	27.42
OQU92863	Sorghum	cytosol	23.25	26.88
KXG34072	Sorghum	cytosol	20.25	23.62
KXG39987	Sorghum	peroxisome	25.25	23.54
EER96987	Sorghum	cytosol	21.0	22.4
EER97679	Sorghum	cytosol	20.25	22.07
EES15354	Sorghum	cytosol	20.0	20.94
EES17800	Sorghum	cytosol	21.5	20.53
EER90006	Sorghum	plastid	21.5	20.43
EES04720	Sorghum	plastid	21.25	19.54
KXG29744	Sorghum	plastid	24.0	18.18
EER88619	Sorghum	cytosol, plastid	23.0	17.76

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EntrezGene:8074503	UniProt:C5XGI4	EnsemblPlants:EES02734	ProteinID:EES02734
ProteinID:EES02734.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005347	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839
GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009579	GO:GO:0009605	GO:GO:0009607
GO:GO:0009624	GO:GO:0009941	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0042651
GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF619	EnsemblPlantsGene:SORBI_3003G122300
SUPFAM:SSF103506	unigene:Sbi.20339	TMHMM:TMhelix	UniParc:UPI0001A84EA4	RefSeq:XP_002457614.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:11134283..11137092

Molecular Weight (calculated)

43253.9 Da

IEP (calculated)

10.165

GRAVY (calculated)

-0.019

Length

400 amino acids

Sequence
(BLAST)

001: MSRRRGETCD SWRPPRKNHA GAPPLLRAGP RIPAFASLSV REGGDAAAAV AKAVEEVVVV QADEVKEQRA ALVAVEERAK TKSTERRLPP AAQLVHHPLA
101: LLALVPNSAA LFAAGAAAGT IAKTVTAPLD RVKILMQTHS VRVAGESAKK GVGFLEAMAD IGKKDGLKGY WKGNLPQVIR IIPYSAVQLF SYEVYKKIFR
201: TKDGELSVFG RLAAGACAGM TSTLVTYPLD VLRLRLAVQS GHSTLPQVAL NMLREEGLAS FYGGLGPSLI AIAPYIAVNF CVFDLMKKSV PEKYKNRPET
301: SLATALLSAT FATLMCYPLD TIRRQMQMKG TPYNTVFDAI PGIVERDGLT GLYRGFVPNA LKNLPNSSIK MTVFDTVKTL IATGQKEMDK LIQENEEKTS

Best Arabidopsis Sequence Match ( AT5G01500.1 )
(BLAST)

001: MGEEKSLLQF RSFPSLKTSD FALTEEPSWR LENNVSSNRR RGNKRSGGVF TNFASLSVAI RRDRRESTFN GRNGGGGGAF ASVSVVIPKE EDEFAPTSAQ
101: LLKNPIALLS IVPKDAALFF AGAFAGAAAK SVTAPLDRIK LLMQTHGVRA GQQSAKKAIG FIEAITLIGK EEGIKGYWKG NLPQVIRIVP YSAVQLFAYE
201: TYKKLFRGKD GQLSVLGRLG AGACAGMTST LITYPLDVLR LRLAVEPGYR TMSQVALNML REEGVASFYN GLGPSLLSIA PYIAINFCVF DLVKKSLPEK
301: YQQKTQSSLL TAVVAAAIAT GTCYPLDTIR RQMQLKGTPY KSVLDAFSGI IAREGVVGLY RGFVPNALKS MPNSSIKLTT FDIVKKLIAA SEKEIQRIAD
401: DNRKKASPNT IDEQT

Arabidopsis Description

TAACThylakoid ADP,ATP carrier protein, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.