CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0934200-01	Rice	cytosol	93.0	94.94
TraesCS3D01G446800.1	Wheat	cytoskeleton, cytosol, plastid	88.05	89.88
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	87.76	89.58
Zm00001d042213_P004	Maize	cytosol, plastid	94.46	83.94
HORVU3Hr1G098170.1	Barley	mitochondrion	88.05	79.47
Zm00001d011918_P002	Maize	cytosol	92.42	79.25
VIT_05s0020g01380.t01	Wine grape	cytosol	74.93	77.88
KRH02242	Soybean	cytosol	72.89	76.45
GSMUA_Achr8P22520_001	Banana	cytosol	73.76	76.44
KRH50868	Soybean	cytosol	73.76	76.44
KRH37122	Soybean	cytosol	71.72	75.0
Solyc01g067070.2.1	Tomato	cytosol	72.3	74.92
TraesCS3B01G493000.1	Wheat	cytosol	88.34	74.81
KRH12112	Soybean	cytosol	71.43	74.7
Solyc12g099630.1.1	Tomato	cytosol	51.02	74.47
CDY19928	Canola	cytosol	70.26	71.94
AT5G48970.1	Thale cress	cytosol	70.85	71.68
Bra036153.1-P	Field mustard	cytosol	69.97	71.64
CDX85385	Canola	cytosol	69.97	71.22
CDX86261	Canola	cytosol	69.97	71.22
CDY56673	Canola	cytosol	70.26	71.09
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	31.49	70.59
PGSC0003DMT400087691	Potato	mitochondrion	33.24	68.26
AT3G21390.2	Thale cress	cytosol	65.6	63.03
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	51.9	57.98
EES20024	Sorghum	cytosol	29.74	28.73
KXG29836	Sorghum	cytosol, mitochondrion, plastid	26.24	26.79
OQU92863	Sorghum	cytosol	25.95	25.72
EES01355	Sorghum	extracellular	25.07	25.6
EES00336	Sorghum	cytosol	24.2	25.15
EES00940	Sorghum	plastid	24.2	24.41
OQU92679	Sorghum	cytosol	8.75	24.19
EER97679	Sorghum	cytosol	24.78	23.16
EES17800	Sorghum	cytosol	28.28	23.15
EER96987	Sorghum	cytosol	24.78	22.67
EER90006	Sorghum	plastid	27.11	22.09
EES04720	Sorghum	plastid	26.53	20.92
EES15354	Sorghum	cytosol	22.74	20.42
EES02734	Sorghum	mitochondrion	23.62	20.25
KXG39987	Sorghum	peroxisome	22.16	17.72
KXG29744	Sorghum	plastid	26.24	17.05
EER88619	Sorghum	cytosol, plastid	25.66	16.99

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A1B6Q821	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KXG34072
ProteinID:KXG34072	ProteinID:KXG34072.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF646	EnsemblPlantsGene:SORBI_3003G416600	SUPFAM:SSF103506
UniParc:UPI0001C80AFE	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:72270158..72277071

Molecular Weight (calculated)

37704.6 Da

IEP (calculated)

9.652

GRAVY (calculated)

-0.039

Length

343 amino acids

Sequence
(BLAST)

001: MGSGEEPSQM RRALVDSLAG AISGGISRTV TSPLDVIKIR FQVQLEPTTS WGILRRDVYG PSKYTGLLQA TKDILREEGL PGFWRGNVPA LMMYMPYTAI
101: QFTVLHKLKT FASGSSRTED HLHLSPYLSY VSGALAGCAA TIGSYPFDLL RTILASQGEP KVYPNMRSAF VDIIKTRGVQ GLYSGLSPTL VEIIPYAGLQ
201: FGSYDTFKRS MMTWNRYKYS HLNLGSEDDS VSSFQLFLCG FAAGTFSKAA CHPLDVVKKR FQVSSVIMQI EGLKRHPRYG ARIESSTYKG MYHALKEIVA
301: KEGFGGLYKG LFPSLVKSAP AGAVTFVAYE YISDWIGSKA GVE

Best Arabidopsis Sequence Match ( AT5G48970.1 )
(BLAST)

001: MIPTTATVDD EPGQIKRALI DASAGAISGG VSRSVTSPLD VIKIRFQVQL EPTTSWGLVR GNLSGASKYT GMVQATKDIF REEGFRGFWR GNVPALLMVM
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW

Arabidopsis Description

Mitochondrial thiamine diphosphate carrier 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.