Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0020g01380.t01 | Wine grape | cytosol | 70.03 | 75.76 |
| KRH02242 | Soybean | cytosol | 68.91 | 75.23 |
| KRH37122 | Soybean | cytosol | 68.91 | 75.0 |
| KRH50868 | Soybean | cytosol | 69.47 | 74.92 |
| KRH12112 | Soybean | cytosol | 68.35 | 74.39 |
| Solyc01g067070.2.1 | Tomato | cytosol | 68.35 | 73.72 |
| PGSC0003DMT400087691 | Potato | mitochondrion | 34.17 | 73.05 |
| AT5G48970.1 | Thale cress | cytosol | 68.35 | 71.98 |
| GSMUA_Achr10P... | Banana | mitochondrion | 26.05 | 69.4 |
| Solyc12g099630.1.1 | Tomato | cytosol | 45.66 | 69.36 |
| Os01t0934200-01 | Rice | cytosol | 63.87 | 67.86 |
| TraesCS3D01G446800.1 | Wheat | cytoskeleton, cytosol, plastid | 62.75 | 66.67 |
| TraesCS3A01G454400.1 | Wheat | cytoskeleton, cytosol, plastid | 62.75 | 66.67 |
| KXG34072 | Sorghum | cytosol | 63.03 | 65.6 |
| Zm00001d042213_P004 | Maize | cytosol, plastid | 63.87 | 59.07 |
| HORVU3Hr1G098170.1 | Barley | mitochondrion | 62.75 | 58.95 |
| Zm00001d011918_P002 | Maize | cytosol | 62.47 | 55.75 |
| TraesCS3B01G493000.1 | Wheat | cytosol | 62.75 | 55.31 |
| AT1G14560.1 | Thale cress | cytosol | 27.17 | 29.31 |
| AT2G37890.1 | Thale cress | cytosol | 26.61 | 28.19 |
| AT3G55640.4 | Thale cress | plastid | 26.05 | 28.01 |
| AT4G26180.1 | Thale cress | cytosol | 25.49 | 27.49 |
| AT4G01100.2 | Thale cress | cytosol | 27.73 | 27.05 |
| AT3G53940.1 | Thale cress | cytosol | 26.33 | 25.75 |
| AT4G32400.1 | Thale cress | cytosol | 25.49 | 23.21 |
| AT3G51870.1 | Thale cress | plastid | 24.37 | 22.83 |
| AT3G20240.1 | Thale cress | cytosol | 21.29 | 21.84 |
| AT5G01500.1 | Thale cress | cytosol | 24.09 | 20.72 |
| AT5G61810.1 | Thale cress | cytosol | 24.09 | 17.99 |
| AT1G78180.1 | Thale cress | plastid | 20.73 | 17.7 |
| AT5G07320.1 | Thale cress | cytosol | 23.25 | 17.33 |
| AT5G64970.1 | Thale cress | cytosol, mitochondrion, plastid | 20.73 | 17.29 |
| AT5G51050.1 | Thale cress | cytosol | 23.53 | 16.87 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | EntrezGene:821693 | UniProt:A0A1I9LRT1 | ProteinID:ANM65289.1 | ArrayExpress:AT3G21390 |
| EnsemblPlantsGene:AT3G21390 | RefSeq:AT3G21390 | TAIR:AT3G21390 | RefSeq:AT3G21390-TAIR-G | EnsemblPlants:AT3G21390.2 | Unigene:At.43250 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006810 | GO:GO:0006839 | GO:GO:0008150 | GO:GO:0015234 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030974 | GO:GO:0031305 | GO:GO:0055085 | GO:GO:0071934 |
| GO:GO:0090422 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
| RefSeq:NP_001327267.1 | PFAM:PF00153 | PRINTS:PR00926 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF628 |
| SUPFAM:SSF103506 | UniParc:UPI000848F28E | SEG:seg | : | : | : |
Description
Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRT1]
Coordinates
chr3:+:7531747..7534544
Molecular Weight (calculated)
39001.2 Da
IEP (calculated)
9.710
GRAVY (calculated)
0.035
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLCVLDVVD TMISGYSKEL VIMSGTELDE PGKLKRAVID ASAGGVAGAI SRMVTSPLDV IKIRFQVQLE PTATWALKDS QLKPKYNGLF RTTKDIFREE
101: GLSGFWRGNV PALLMVVPYT SIQFAVLHKV KSFAAGSSKA ENHAQLSPYL SYISGALAGC AATVGSYPFD LLRTVLASQG EPKVYPNMRS AFLSIVQTRG
201: IKGLYAGLSP TLIEIIPYAG LQFGTYDTFK RWSMVYNKRY RSSSSSSTNP SDSLSSFQLF LCGLASGTVS KLVCHPLDVV KKRFQVEGLQ RHPKYGARVE
301: LNAYKNMFDG LGQILRSEGW HGLYKGIVPS TIKAAPAGAV TFVAYELASD WFEANLT
101: GLSGFWRGNV PALLMVVPYT SIQFAVLHKV KSFAAGSSKA ENHAQLSPYL SYISGALAGC AATVGSYPFD LLRTVLASQG EPKVYPNMRS AFLSIVQTRG
201: IKGLYAGLSP TLIEIIPYAG LQFGTYDTFK RWSMVYNKRY RSSSSSSTNP SDSLSSFQLF LCGLASGTVS KLVCHPLDVV KKRFQVEGLQ RHPKYGARVE
301: LNAYKNMFDG LGQILRSEGW HGLYKGIVPS TIKAAPAGAV TFVAYELASD WFEANLT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.