Factsheet for Zm00001d011918_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34072	Sorghum	cytosol	79.25	92.42
Os01t0934200-01	Rice	cytosol	76.25	90.77
TraesCS3D01G446800.1	Wheat	cytoskeleton, cytosol, plastid	73.25	87.2
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	73.0	86.9
Zm00001d042213_P004	Maize	cytosol, plastid	80.5	83.42
HORVU3Hr1G098170.1	Barley	mitochondrion	73.5	77.37
GSMUA_Achr8P22520_001	Banana	cytosol	62.25	75.23
VIT_05s0020g01380.t01	Wine grape	cytosol	62.0	75.15
KRH02242	Soybean	cytosol	61.25	74.92
KRH50868	Soybean	cytosol	61.75	74.62
Solyc12g099630.1.1	Tomato	cytosol	43.0	73.19
KRH37122	Soybean	cytosol	59.75	72.87
Solyc01g067070.2.1	Tomato	cytosol	60.25	72.81
TraesCS3B01G493000.1	Wheat	cytosol	73.5	72.59
KRH12112	Soybean	cytosol	59.5	72.56
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	26.75	69.93
CDY19928	Canola	cytosol	58.25	69.55
AT5G48970.1	Thale cress	cytosol	58.75	69.32
Bra036153.1-P	Field mustard	cytosol	58.0	69.25
CDY56673	Canola	cytosol	58.5	69.03
CDX85385	Canola	cytosol	58.0	68.84
CDX86261	Canola	cytosol	58.0	68.84
PGSC0003DMT400087691	Potato	mitochondrion	27.75	66.47
AT3G21390.2	Thale cress	cytosol	55.75	62.47
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	43.0	56.03
Zm00001d016299_P001	Maize	cytosol, mitochondrion, plastid	22.75	27.16
Zm00001d049104_P001	Maize	cytosol, mitochondrion, plastid	12.5	26.32
Zm00001d011697_P001	Maize	peroxisome	21.75	26.2
Zm00001d047838_P001	Maize	cytosol	21.75	25.36
Zm00001d039884_P002	Maize	cytosol	20.75	25.3
Zm00001d011226_P002	Maize	plastid	20.75	24.41
Zm00001d028008_P001	Maize	mitochondrion	16.5	24.35
Zm00001d052515_P001	Maize	cytosol	8.75	23.97
Zm00001d037640_P001	Maize	plastid	24.25	23.89
Zm00001d009799_P001	Maize	plastid	23.75	23.4
Zm00001d022406_P002	Maize	cytosol	21.25	21.96
Zm00001d020980_P001	Maize	cytosol	20.5	21.93
Zm00001d046400_P002	Maize	mitochondrion	23.0	21.9
Zm00001d014331_P001	Maize	cytosol	9.0	21.43
Zm00001d009318_P001	Maize	cytosol	6.0	21.24
Zm00001d015746_P001	Maize	plastid	22.25	20.37
Zm00001d031527_P001	Maize	cytosol	19.25	20.26
Zm00001d040351_P005	Maize	mitochondrion	20.5	20.2
Zm00001d028009_P001	Maize	peroxisome	20.25	19.06
Zm00001d048218_P001	Maize	endoplasmic reticulum	19.75	18.24
Zm00001d014170_P001	Maize	cytosol	8.0	16.67
Zm00001d053640_P001	Maize	plasma membrane	21.75	16.45
Zm00001d046509_P002	Maize	plastid	21.25	15.4

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A1X8CQ93	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089
PANTHER:PTHR24089:SF646	SUPFAM:SSF103506	UniParc:UPI000842B2FD	EnsemblPlantsGene:Zm00001d011918	EnsemblPlants:Zm00001d011918_P002	EnsemblPlants:Zm00001d011918_T002

Description

thiamine diphosphate carrier protein1 thiamine diphosphate carrier protein1

Coordinates

chr8:-:164545278..164552085

Molecular Weight (calculated)

44593.1 Da

IEP (calculated)

9.187

GRAVY (calculated)

-0.007

Length

400 amino acids

Sequence
(BLAST)

001: MGSGEEPSQM RRALVDSLAG AISGGISRTV TSPLDVIKIR FQLVWAEMLM RVLLSLDGWK CCWFSETKVR DFCKGKCNVM SVQLEPTTSW GILRRDVYGP
101: SKYTGLLQAT KDILREEGLP GFWRGNVPAL FMYMPYTAIQ FTVLHKLKTF ASGSSRTEDH LDLSPYLSYV SGAIAGCTAT IGSYPFDLLR TILASQGEPK
201: VYPNMRSAFI DIIKTRGVQG LYSGLSPTLV EIIPYAGLQF GSYDTFKRSM MTWNRYKYSH LSFGSEDDSV SSFQLFLCGF AAGTFSKAAC HPLDVVKKRF
301: QIEGLKRHPR YGAPIESSTY KGMYHALKEI VVKEGFGGLY KGLFPSLVKS APAGAVTFVV YEYISDCSIG SCSPYEVWEP AKINWMIHAR KLLSWVLANH

Best Arabidopsis Sequence Match ( AT3G21390.1 )
(BLAST)

001: MSGTELDEPG KLKRAVIDAS AGGVAGAISR MVTSPLDVIK IRFQVQLEPT ATWALKDSQL KPKYNGLFRT TKDIFREEGL SGFWRGNVPA LLMVVPYTSI
101: QFAVLHKVKS FAAGSSKAEN HAQLSPYLSY ISGALAGCAA TVGSYPFDLL RTVLASQGEP KVYPNMRSAF LSIVQTRGIK GLYAGLSPTL IEIIPYAGLQ
201: FGTYDTFKRW SMVYNKRYRS SSSSSTNPSD SLSSFQLFLC GLASGTVSKL VCHPLDVVKK RFQVEGLQRH PKYGARVELN AYKNMFDGLG QILRSEGWHG
301: LYKGIVPSTI KAAPAGAVTF VAYELASDWF EANLT

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRT1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.