Factsheet for Solyc01g067070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g01380.t01	Wine grape	cytosol	81.27	81.52
KRH37122	Soybean	cytosol	80.06	80.79
KRH12112	Soybean	cytosol	79.46	80.18
KRH50868	Soybean	cytosol	80.06	80.06
KRH02242	Soybean	cytosol	78.85	79.82
Solyc12g099630.1.1	Tomato	cytosol	56.19	79.15
AT5G48970.1	Thale cress	cytosol	78.25	76.4
CDY19928	Canola	cytosol	76.74	75.82
Bra036153.1-P	Field mustard	cytosol	76.74	75.82
Os01t0934200-01	Rice	cytosol	76.13	75.0
CDX86261	Canola	cytosol	76.13	74.78
CDX85385	Canola	cytosol	76.13	74.78
CDY56673	Canola	cytosol	76.44	74.63
TraesCS3D01G446800.1	Wheat	cytoskeleton, cytosol, plastid	73.41	72.32
KXG34072	Sorghum	cytosol	74.92	72.3
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	73.11	72.02
AT3G21390.2	Thale cress	cytosol	73.72	68.35
GSMUA_Achr10P...	Banana	mitochondrion	27.49	67.91
Zm00001d042213_P004	Maize	cytosol, plastid	75.53	64.77
HORVU3Hr1G098170.1	Barley	mitochondrion	73.72	64.21
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	55.89	60.26
Zm00001d011918_P002	Maize	cytosol	72.81	60.25
TraesCS3B01G493000.1	Wheat	cytosol	73.41	60.0
Solyc10g011670.2.1	Tomato	cytosol	31.42	29.3
Solyc08g082020.2.1	Tomato	cytosol	30.82	28.57
Solyc01g095570.2.1	Tomato	cytosol	30.21	28.17
Solyc12g008770.1.1	Tomato	extracellular	26.59	26.04
Solyc08g062860.2.1	Tomato	cytosol	26.59	25.66
Solyc09g011360.2.1	Tomato	cytosol, peroxisome, plastid	25.68	23.94
Solyc09g005250.2.1	Tomato	plastid	25.68	22.37
Solyc08g061090.2.1	Tomato	plastid	25.68	21.36
Solyc03g123990.2.1	Tomato	cytosol	23.57	21.25
Solyc05g051560.2.1	Tomato	nucleus	24.47	19.06
Solyc04g056260.1.1	Tomato	cytosol, nucleus	23.57	18.31
Solyc04g074130.2.1	Tomato	cytosol	23.57	18.01
Solyc06g068720.2.1	Tomato	cytosol	26.89	17.8
Solyc03g118090.2.1	Tomato	cytosol	25.38	16.73

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150
GO:GO:0015234	GO:GO:0016020	GO:GO:0016021	GO:GO:0030974	GO:GO:0031305	GO:GO:0055085
GO:GO:0071934	InterPro:IPR018108	InterPro:IPR023395	UniProt:K4AWV6	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF646
SUPFAM:SSF103506	EnsemblPlantsGene:Solyc01g067070.2	EnsemblPlants:Solyc01g067070.2.1	UniParc:UPI0002762D51	:	:

Description

No Description!

Coordinates

chr1:+:75404477..75410839

Molecular Weight (calculated)

36401.1 Da

IEP (calculated)

9.582

GRAVY (calculated)

-0.021

Length

331 amino acids

Sequence
(BLAST)

001: MEETGQLKRA FIDASAGAIS GGISRTVTSP LDVIKIRFQV QLEPTTQWAL LTRTVCGNSN SKYTGMLQAS KDILREEGLP GFWRGNVPAL LMVMPYTAIQ
101: FAVLHKLKSF ASGSSKSEDH VNLSPYLSYI SGALAGCAAT VGSYPFDLLR TILASQGEPK VYPNMRAASV DIFRTRGIRG LYSGLTPTLV EIVPYAGLQF
201: GTYDTFKRWM MAWNHLRSSN AIHGDEQVSS FQLFICGLAA GTCAKAVCHP LDVVKKRFQI EGLQRHPRYG AQLKPHAYKN MYDGLRRILI EEGWAGLYKG
301: IVPSVIKAAP AGAVTFVAYE YTSDWLESKL T

Best Arabidopsis Sequence Match ( AT5G48970.1 )
(BLAST)

001: MIPTTATVDD EPGQIKRALI DASAGAISGG VSRSVTSPLD VIKIRFQVQL EPTTSWGLVR GNLSGASKYT GMVQATKDIF REEGFRGFWR GNVPALLMVM
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW

Arabidopsis Description

Mitochondrial thiamine diphosphate carrier 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.