Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400004751 | Potato | mitochondrion | 37.09 | 98.75 |
| Zm00001d052515_P001 | Maize | cytosol | 27.93 | 81.51 |
| GSMUA_Achr6P03370_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 56.81 | 81.48 |
| Zm00001d009318_P001 | Maize | cytosol | 21.36 | 80.53 |
| GSMUA_Achr4P24190_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 54.93 | 78.52 |
| Solyc05g051560.2.1 | Tomato | nucleus | 77.7 | 77.88 |
| Zm00001d028008_P001 | Maize | mitochondrion | 47.42 | 74.54 |
| Zm00001d014331_P001 | Maize | cytosol | 28.64 | 72.62 |
| Bra031891.1-P | Field mustard | cytosol | 46.01 | 72.59 |
| GSMUA_Achr2P14780_001 | Banana | mitochondrion | 55.4 | 68.21 |
| VIT_10s0042g01030.t01 | Wine grape | cytosol | 19.01 | 65.85 |
| KRH43178 | Soybean | plastid | 63.38 | 65.06 |
| VIT_00s0665g00020.t01 | Wine grape | plastid | 62.91 | 64.89 |
| CDY31292 | Canola | cytosol | 51.41 | 62.57 |
| Os03t0191100-01 | Rice | mitochondrion, peroxisome, plastid | 61.5 | 62.23 |
| HORVU4Hr1G078650.2 | Barley | peroxisome | 61.03 | 62.2 |
| TraesCS4D01G304600.1 | Wheat | peroxisome | 61.03 | 61.9 |
| TraesCS4B01G306400.1 | Wheat | peroxisome | 61.03 | 61.9 |
| CDY14527 | Canola | plastid | 60.56 | 61.87 |
| CDY08834 | Canola | plastid | 60.33 | 61.48 |
| TraesCS4A01G407200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 61.03 | 61.47 |
| AT5G64970.1 | Thale cress | cytosol, mitochondrion, plastid | 61.74 | 61.45 |
| Bra024342.1-P | Field mustard | plastid | 60.09 | 61.24 |
| Zm00001d028009_P001 | Maize | peroxisome | 60.56 | 60.71 |
| KXG39987 | Sorghum | peroxisome | 60.8 | 60.37 |
| CDX79251 | Canola | plastid | 56.34 | 60.3 |
| Zm00001d048218_P001 | Maize | endoplasmic reticulum | 61.03 | 60.05 |
| Bra003653.1-P | Field mustard | plastid | 55.87 | 59.95 |
| CDX68026 | Canola | plastid | 55.63 | 59.7 |
| CDX97455 | Canola | plastid | 21.13 | 59.6 |
| AT1G78180.1 | Thale cress | plastid | 57.98 | 59.09 |
| Solyc04g074130.2.1 | Tomato | cytosol | 59.62 | 58.66 |
| CDY33993 | Canola | plastid | 47.89 | 57.14 |
| Zm00001d014170_P001 | Maize | cytosol | 24.65 | 54.69 |
| CDY39471 | Canola | cytosol | 35.68 | 37.91 |
| Solyc10g011670.2.1 | Tomato | cytosol | 23.94 | 28.73 |
| Solyc01g095570.2.1 | Tomato | cytosol | 23.71 | 28.45 |
| Solyc08g082020.2.1 | Tomato | cytosol | 23.0 | 27.45 |
| Solyc08g061090.2.1 | Tomato | plastid | 25.59 | 27.39 |
| Solyc08g062860.2.1 | Tomato | cytosol | 21.13 | 26.24 |
| Solyc12g008770.1.1 | Tomato | extracellular | 20.42 | 25.74 |
| Solyc09g011360.2.1 | Tomato | cytosol, peroxisome, plastid | 20.42 | 24.51 |
| Solyc09g005250.2.1 | Tomato | plastid | 21.13 | 23.68 |
| Solyc01g067070.2.1 | Tomato | cytosol | 18.31 | 23.57 |
| Solyc12g099630.1.1 | Tomato | cytosol | 12.44 | 22.55 |
| Solyc03g123990.2.1 | Tomato | cytosol | 19.01 | 22.07 |
| Solyc03g118090.2.1 | Tomato | cytosol | 22.3 | 18.92 |
| Solyc06g068720.2.1 | Tomato | cytosol | 22.07 | 18.8 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006810 | GO:GO:0006839 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR018108 |
| InterPro:IPR023395 | UniProt:K4BSS4 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PFAM:PF00153 |
| PRINTS:PR00926 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF339 | SUPFAM:SSF103506 | EnsemblPlantsGene:Solyc04g056260.1 |
| EnsemblPlants:Solyc04g056260.1.1 | UniParc:UPI0002765C5A | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4:+:53916325..53922066
Molecular Weight (calculated)
46325.3 Da
IEP (calculated)
8.782
GRAVY (calculated)
0.063
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDLEIRLKG LIQSESKSNG VGCLSLRSSV LCLNSIGFDG NNGGSLFEDS ARESFVSLIS MENCFPSKCM LRARRSSWRG RGRFLSVTLS DSNEILGKNG
101: EAAVAESEVN VCKEVEKVEK GKLHGGGGGA FNTTKHLWSG AVAAMVSRTF VAPLERLKLE YIVRGEQKNL FELIKTIAAT QGIKGFWKGN FVNILRTAPF
201: KAIHFYSYEK YRDHLLKITG NEEATNIERF VAGAAAGITA TVLCIPMDTI RTVMVAPGGE ALGGLIGTSR HMIQTEGFFS LYKGLVPSII SMAPSGAVFY
301: GVYDILKSAY LHSPEGRKRL ENMKQGEDLN ALDQLELGTV RTLVYGAIAG ACAEAATYPF EVVRRQLQLQ VRATKMSTLA TTLKIVEQGG IPALYTGLTP
401: SLLQVLPSAA ISYFVYEFMK IVLEVE
101: EAAVAESEVN VCKEVEKVEK GKLHGGGGGA FNTTKHLWSG AVAAMVSRTF VAPLERLKLE YIVRGEQKNL FELIKTIAAT QGIKGFWKGN FVNILRTAPF
201: KAIHFYSYEK YRDHLLKITG NEEATNIERF VAGAAAGITA TVLCIPMDTI RTVMVAPGGE ALGGLIGTSR HMIQTEGFFS LYKGLVPSII SMAPSGAVFY
301: GVYDILKSAY LHSPEGRKRL ENMKQGEDLN ALDQLELGTV RTLVYGAIAG ACAEAATYPF EVVRRQLQLQ VRATKMSTLA TTLKIVEQGG IPALYTGLTP
401: SLLQVLPSAA ISYFVYEFMK IVLEVE
001: MRGLDRWIAE AIRSESLDHN GQIICGGLFL EESLPSSSVS FLSSKDCSVN SCRFSQKSSF LKFRRRNGTR EPLFLSVSLS INESNGEEEE GEGYNGQNGF
101: KSEKGSVLIG GGQESKEKRR VKENGAGALN TTKHLWAGAF AAMVSRTCIA PLERMKLEYI VRGEQGNLLE LIQRIATNEG IRGFWKGNLV NILRTAPFKS
201: INFYAYDTYR GQLLKLSGNE ETTNFERFVA GAAAGVTASL LCLPLDTIRT VMVAPGGEAL GGVVGAFRHM IQTEGFFSLY KGLVPSLVSM APSGAVFYGV
301: YDILKSAYLH TPEGKKRLEH MKQEGEELNA FDQLELGPMR TLLYGAIAGA CSEAATYPFE VVRRRLQMQS HAKRLSAVAT CVKIIEQGGV PALYAGLIPS
401: LLQVLPSAAI SYFVYEFMKV VLKVESSA
101: KSEKGSVLIG GGQESKEKRR VKENGAGALN TTKHLWAGAF AAMVSRTCIA PLERMKLEYI VRGEQGNLLE LIQRIATNEG IRGFWKGNLV NILRTAPFKS
201: INFYAYDTYR GQLLKLSGNE ETTNFERFVA GAAAGVTASL LCLPLDTIRT VMVAPGGEAL GGVVGAFRHM IQTEGFFSLY KGLVPSLVSM APSGAVFYGV
301: YDILKSAYLH TPEGKKRLEH MKQEGEELNA FDQLELGPMR TLLYGAIAGA CSEAATYPFE VVRRRLQMQS HAKRLSAVAT CVKIIEQGGV PALYAGLIPS
401: LLQVLPSAAI SYFVYEFMKV VLKVESSA
Arabidopsis Description
Probable mitochondrial adenine nucleotide transporter BTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV81]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.