Factsheet for Solyc12g099630.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g067070.2.1	Tomato	cytosol	79.15	56.19
VIT_05s0020g01380.t01	Wine grape	cytosol	78.3	55.76
KRH50868	Soybean	cytosol	77.45	54.98
KRH02242	Soybean	cytosol	75.32	54.13
KRH37122	Soybean	cytosol	75.32	53.96
KRH12112	Soybean	cytosol	73.62	52.74
Os01t0934200-01	Rice	cytosol	75.32	52.68
CDY19928	Canola	cytosol	74.04	51.94
Bra036153.1-P	Field mustard	cytosol	73.62	51.64
TraesCS3D01G446800.1	Wheat	cytoskeleton, cytosol, plastid	73.62	51.49
CDY56673	Canola	cytosol	74.04	51.33
TraesCS3A01G454400.1	Wheat	cytoskeleton, cytosol, plastid	73.19	51.19
CDX86261	Canola	cytosol	73.19	51.04
KXG34072	Sorghum	cytosol	74.47	51.02
CDX85385	Canola	cytosol	72.77	50.74
AT5G48970.1	Thale cress	cytosol	73.19	50.74
Zm00001d042213_P004	Maize	cytosol, plastid	75.32	45.85
AT3G21390.2	Thale cress	cytosol	69.36	45.66
HORVU3Hr1G098170.1	Barley	mitochondrion	73.62	45.53
Zm00001d011918_P002	Maize	cytosol	73.19	43.0
TraesCS3B01G493000.1	Wheat	cytosol	73.62	42.72
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	54.89	42.02
PGSC0003DMT400087691	Potato	mitochondrion	23.4	32.93
Solyc10g011670.2.1	Tomato	cytosol	32.34	21.41
Solyc01g095570.2.1	Tomato	cytosol	30.64	20.28
Solyc08g082020.2.1	Tomato	cytosol	29.79	19.61
Solyc12g008770.1.1	Tomato	extracellular	27.66	19.23
Solyc08g062860.2.1	Tomato	cytosol	25.96	17.78
Solyc09g011360.2.1	Tomato	cytosol, peroxisome, plastid	25.53	16.9
Solyc09g005250.2.1	Tomato	plastid	27.23	16.84
Solyc08g061090.2.1	Tomato	plastid	24.26	14.32
Solyc03g123990.2.1	Tomato	cytosol	21.7	13.9
Solyc04g074130.2.1	Tomato	cytosol	25.53	13.86
Solyc06g068720.2.1	Tomato	cytosol	28.09	13.2
Solyc05g051560.2.1	Tomato	nucleus	23.83	13.18
Solyc04g056260.1.1	Tomato	cytosol, nucleus	22.55	12.44
Solyc03g118090.2.1	Tomato	cytosol	23.83	11.16
GSMUA_Achr10P...	Banana	mitochondrion	5.96	10.45

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150
GO:GO:0015234	GO:GO:0016020	GO:GO:0016021	GO:GO:0030974	GO:GO:0031305	GO:GO:0055085
GO:GO:0071934	InterPro:IPR018108	InterPro:IPR023395	UniProt:K4DHY4	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF646
SUPFAM:SSF103506	EnsemblPlantsGene:Solyc12g099630.1	EnsemblPlants:Solyc12g099630.1.1	UniParc:UPI000276A857	SEG:seg	:

Description

No Description!

Coordinates

chr12:+:66701781..66705899

Molecular Weight (calculated)

25860.5 Da

IEP (calculated)

10.174

GRAVY (calculated)

0.089

Length

235 amino acids

Sequence
(BLAST)

001: MEDTGQLKRA LIDATAGAVS GGISRTVTSP LDVIKIRFQV QLEPTNQWAS LRNFVHGTSK YTGMLQATKD ILREEGLKGF WRGNVPALLM VMPYTAIQFT
101: VLQQLKTFAA GSSKTEDHIN LSPYLSYISG ALAGCAATVG SYPFDLLRTI LASQGEPKIY RNMRSAFIDI FRARGVPGLY AGLTPTLVEI APYAGLQFGT
201: YDTFKRWMKA WNRLNLLTQA KVMSLFLAFS SSSVV

Best Arabidopsis Sequence Match ( AT5G48970.1 )
(BLAST)

001: MIPTTATVDD EPGQIKRALI DASAGAISGG VSRSVTSPLD VIKIRFQVQL EPTTSWGLVR GNLSGASKYT GMVQATKDIF REEGFRGFWR GNVPALLMVM
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW

Arabidopsis Description

Mitochondrial thiamine diphosphate carrier 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.