Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G446800.1 | Wheat | cytoskeleton, cytosol, plastid | 82.72 | 99.7 |
| TraesCS3A01G454400.1 | Wheat | cytoskeleton, cytosol, plastid | 82.22 | 99.11 |
| HORVU3Hr1G098170.1 | Barley | mitochondrion | 85.19 | 90.79 |
| Os01t0934200-01 | Rice | cytosol | 75.31 | 90.77 |
| KXG34072 | Sorghum | cytosol | 74.81 | 88.34 |
| Zm00001d042213_P004 | Maize | cytosol, plastid | 72.35 | 75.91 |
| VIT_05s0020g01380.t01 | Wine grape | cytosol | 60.74 | 74.55 |
| KRH37122 | Soybean | cytosol | 60.0 | 74.09 |
| KRH12112 | Soybean | cytosol | 59.75 | 73.78 |
| GSMUA_Achr8P22520_001 | Banana | cytosol | 60.25 | 73.72 |
| KRH50868 | Soybean | cytosol | 60.25 | 73.72 |
| Solyc12g099630.1.1 | Tomato | cytosol | 42.72 | 73.62 |
| Zm00001d011918_P002 | Maize | cytosol | 72.59 | 73.5 |
| Solyc01g067070.2.1 | Tomato | cytosol | 60.0 | 73.41 |
| KRH02242 | Soybean | cytosol | 59.01 | 73.09 |
| AT5G48970.1 | Thale cress | cytosol | 58.27 | 69.62 |
| CDY19928 | Canola | cytosol | 57.53 | 69.55 |
| Bra036153.1-P | Field mustard | cytosol | 57.28 | 69.25 |
| CDX86261 | Canola | cytosol | 57.53 | 69.14 |
| CDX85385 | Canola | cytosol | 57.53 | 69.14 |
| CDY56673 | Canola | cytosol | 57.53 | 68.73 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus | 25.68 | 67.97 |
| PGSC0003DMT400087691 | Potato | mitochondrion | 27.9 | 67.66 |
| AT3G21390.2 | Thale cress | cytosol | 55.31 | 62.75 |
| Bra037443.1-P | Field mustard | cytosol, mitochondrion, plastid | 41.48 | 54.72 |
| TraesCS1B01G459400.1 | Wheat | cytosol | 25.43 | 29.1 |
| TraesCS4B01G211000.1 | Wheat | plastid | 22.22 | 26.87 |
| TraesCS6B01G231800.3 | Wheat | cytosol | 21.98 | 26.57 |
| TraesCS3B01G238400.1 | Wheat | cytosol, plastid, vacuole | 15.06 | 25.74 |
| TraesCS3B01G280800.1 | Wheat | cytosol, mitochondrion, plastid | 20.49 | 24.63 |
| TraesCS3B01G070700.1 | Wheat | cytosol, mitochondrion, peroxisome | 20.0 | 24.62 |
| TraesCS5B01G299100.1 | Wheat | plastid | 18.77 | 23.9 |
| TraesCS1B01G135400.1 | Wheat | cytosol | 23.7 | 23.3 |
| TraesCS7B01G401600.1 | Wheat | cytosol | 23.7 | 22.64 |
| TraesCS7B01G138400.1 | Wheat | cytosol | 20.25 | 22.04 |
| TraesCS6B01G210000.1 | Wheat | plastid | 22.96 | 21.68 |
| TraesCS3B01G211500.1 | Wheat | golgi | 20.49 | 21.34 |
| TraesCS5B01G274300.1 | Wheat | cytosol | 19.75 | 20.78 |
| TraesCS4B01G306400.1 | Wheat | peroxisome | 18.77 | 18.1 |
| TraesCS7B01G278000.1 | Wheat | cytosol, plastid | 21.98 | 17.28 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G493000.1 | EnsemblPlantsGene:TraesCS3B01G493000 | Gene3D:1.50.40.10 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF646 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | SEG:seg | SUPFAM:SSF103506 |
| MapMan:24.2.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:738693658..738699680
Molecular Weight (calculated)
44546.4 Da
IEP (calculated)
9.905
GRAVY (calculated)
-0.246
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQYKDTAFG REETETETWP ARPPAHHRPK SQKGERRQTW PGRLLPRSQN PEAAPAQARP LVPLRAAVAM GAGAGAAEEP SQTRRALVDT LAGAISGGIS
101: RTVTSPLDVI KIRFQVQLEP TAKWGVLRRD VYGPSKYTGL MQATKDILRE EGLPGFWRGN VPALFMYMPY TAIQFTVLHK LKTFASGSSR TEDHLHLSPY
201: LSYVSGAIAG SAATVGSYPF DLLRTILASQ GEPKVYPNMR SALVDIVQTR GVRGLYAGLT PTLVEIIPYA GLQFGSYDTF KRSMMSWNRY RYGIEEDDSA
301: SSFQLFLCGF AAGTFSKAAC HPLDVVKKRF QIEGLKRHPR YGARIESSTY KGMYHALTEI VVKEGFGGLY KGLFPSVVKS APAGAVTFVA YEYISDWIGA
401: KAGVE
101: RTVTSPLDVI KIRFQVQLEP TAKWGVLRRD VYGPSKYTGL MQATKDILRE EGLPGFWRGN VPALFMYMPY TAIQFTVLHK LKTFASGSSR TEDHLHLSPY
201: LSYVSGAIAG SAATVGSYPF DLLRTILASQ GEPKVYPNMR SALVDIVQTR GVRGLYAGLT PTLVEIIPYA GLQFGSYDTF KRSMMSWNRY RYGIEEDDSA
301: SSFQLFLCGF AAGTFSKAAC HPLDVVKKRF QIEGLKRHPR YGARIESSTY KGMYHALTEI VVKEGFGGLY KGLFPSVVKS APAGAVTFVA YEYISDWIGA
401: KAGVE
001: MIPTTATVDD EPGQIKRALI DASAGAISGG VSRSVTSPLD VIKIRFQVQL EPTTSWGLVR GNLSGASKYT GMVQATKDIF REEGFRGFWR GNVPALLMVM
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW
Arabidopsis Description
Mitochondrial thiamine diphosphate carrier 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI73]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.