Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G093400.1 | Wheat | cytosol | 99.7 | 97.66 |
| TraesCS4D01G211700.2 | Wheat | cytosol | 99.4 | 97.08 |
| HORVU4Hr1G060540.1 | Barley | cytosol | 97.61 | 95.61 |
| Os03t0267700-01 | Rice | cytosol | 87.16 | 84.39 |
| Zm00001d047838_P001 | Maize | cytosol | 85.07 | 83.09 |
| OQU92863 | Sorghum | cytosol | 85.67 | 82.95 |
| OQU92679 | Sorghum | cytosol | 30.45 | 82.26 |
| GSMUA_Achr8P02430_001 | Banana | cytosol | 77.01 | 73.5 |
| KRH49196 | Soybean | endoplasmic reticulum | 57.91 | 70.55 |
| GSMUA_Achr10P... | Banana | cytosol | 68.66 | 68.25 |
| VIT_08s0007g01280.t01 | Wine grape | cytosol | 68.06 | 67.86 |
| KRH15037 | Soybean | cytosol | 65.67 | 67.48 |
| KRH00061 | Soybean | cytosol | 66.57 | 67.17 |
| KRH73096 | Soybean | cytosol | 65.37 | 66.97 |
| KRH65929 | Soybean | cytosol, mitochondrion, peroxisome | 65.37 | 65.77 |
| PGSC0003DMT400062351 | Potato | cytosol | 68.96 | 65.62 |
| Solyc09g011360.2.1 | Tomato | cytosol, peroxisome, plastid | 68.96 | 65.07 |
| AT3G55640.4 | Thale cress | plastid | 63.28 | 63.86 |
| VIT_13s0019g02440.t01 | Wine grape | cytosol | 68.06 | 63.16 |
| GSMUA_Achr6P33950_001 | Banana | plastid | 74.63 | 62.5 |
| CDY40244 | Canola | plastid | 62.09 | 62.09 |
| TraesCS3B01G070700.1 | Wheat | cytosol, mitochondrion, peroxisome | 60.9 | 62.01 |
| Bra000026.1-P | Field mustard | plastid | 60.3 | 59.41 |
| CDY07764 | Canola | plastid | 60.3 | 59.41 |
| CDY18420 | Canola | plastid | 60.9 | 59.13 |
| CDX93344 | Canola | plastid | 60.6 | 58.84 |
| Bra017151.1-P | Field mustard | plastid | 60.6 | 58.84 |
| CDY59491 | Canola | cytosol | 59.7 | 58.82 |
| Bra007181.1-P | Field mustard | plastid | 62.09 | 58.43 |
| CDY41199 | Canola | plastid | 62.69 | 58.33 |
| AT3G53940.1 | Thale cress | cytosol | 61.79 | 56.71 |
| CDX76183 | Canola | cytosol | 58.81 | 56.29 |
| CDY13155 | Canola | cytosol | 58.81 | 56.29 |
| Bra014855.1-P | Field mustard | cytosol | 60.0 | 56.15 |
| AT2G37890.1 | Thale cress | cytosol | 54.63 | 54.3 |
| TraesCS3B01G238400.1 | Wheat | cytosol, plastid, vacuole | 22.69 | 32.07 |
| TraesCS3B01G280800.1 | Wheat | cytosol, mitochondrion, plastid | 31.64 | 31.45 |
| TraesCS1B01G459400.1 | Wheat | cytosol | 31.34 | 29.66 |
| TraesCS6B01G231800.3 | Wheat | cytosol | 29.55 | 29.55 |
| TraesCS5B01G299100.1 | Wheat | plastid | 27.16 | 28.62 |
| TraesCS3B01G211500.1 | Wheat | golgi | 27.76 | 23.91 |
| TraesCS3B01G493000.1 | Wheat | cytosol | 26.87 | 22.22 |
| TraesCS1B01G135400.1 | Wheat | cytosol | 27.16 | 22.09 |
| TraesCS7B01G278000.1 | Wheat | cytosol, plastid | 33.73 | 21.94 |
| TraesCS6B01G210000.1 | Wheat | plastid | 28.06 | 21.91 |
| TraesCS7B01G401600.1 | Wheat | cytosol | 26.87 | 21.23 |
| TraesCS5B01G274300.1 | Wheat | cytosol | 24.18 | 21.04 |
| TraesCS7B01G138400.1 | Wheat | cytosol | 22.69 | 20.43 |
| TraesCS4B01G306400.1 | Wheat | peroxisome | 24.78 | 19.76 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G211000.1 | EnsemblPlantsGene:TraesCS4B01G211000 | Gene3D:1.50.40.10 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF403 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | SEG:seg | SUPFAM:SSF103506 |
| MapMan:24.2.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:449510604..449513560
Molecular Weight (calculated)
36376.9 Da
IEP (calculated)
9.606
GRAVY (calculated)
-0.010
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAATVDGAA AVAARRYSTQ QQQQPQPQQH HNQPKLGTTL HLLAGGVAGA VSKTCTAPLA RLTILFQVQG MHSDVATMRN TSIWREASRI VYEEGLRAFW
101: KGNLVTIAHR LPYSSISFYT YERYKNWLQM IPGLDSNGGL GADVGVRMVG GGLSGITAAS LTYPLDLVRT RLAAQTNTAY YRGISHALFA ICRDEGPRGL
201: YKGLGPTLLG VGPSIAISFS VYETLRSHWL LERPCDSPIF ISLACGSLSG VASSTFTFPL DLVRRRKQLE GAAGRANVYK TGLVGTFGHI IQTEGYRGLY
301: RGILPEYCKV VPSVGLIFMT YETLKSMFTE GASDE
101: KGNLVTIAHR LPYSSISFYT YERYKNWLQM IPGLDSNGGL GADVGVRMVG GGLSGITAAS LTYPLDLVRT RLAAQTNTAY YRGISHALFA ICRDEGPRGL
201: YKGLGPTLLG VGPSIAISFS VYETLRSHWL LERPCDSPIF ISLACGSLSG VASSTFTFPL DLVRRRKQLE GAAGRANVYK TGLVGTFGHI IQTEGYRGLY
301: RGILPEYCKV VPSVGLIFMT YETLKSMFTE GASDE
001: MVMQTEARVG VSSGHGVASS SHRLTQDQRS HIESASQLLA GGLAGAFSKT CTAPLSRLTI LFQVQGMHTN AAALRKPSIL HEASRILNEE GLKAFWKGNL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL
Arabidopsis Description
Ca-dependent solute carrier-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M058]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.