Factsheet for TraesCS6B01G231800.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G176300.3	Wheat	cytosol	98.81	98.81
TraesCS6A01G187900.2	Wheat	cytosol	98.21	98.21
HORVU6Hr1G042080.7	Barley	cytosol	96.12	95.83
KXG29836	Sorghum	cytosol, mitochondrion, plastid	85.67	85.42
Zm00001d016299_P001	Maize	cytosol, mitochondrion, plastid	84.78	84.78
Os02t0226300-00	Rice	cytosol, mitochondrion, plastid	76.72	71.99
GSMUA_Achr10P...	Banana	cytosol	73.13	70.61
Solyc12g008770.1.1	Tomato	extracellular	68.36	67.75
VIT_11s0016g02470.t01	Wine grape	cytosol	68.66	67.45
PGSC0003DMT400000910	Potato	cytosol	68.66	67.25
KRH49045	Soybean	cytosol	63.88	66.25
AT4G26180.1	Thale cress	cytosol	64.18	64.95
GSMUA_Achr7P09310_001	Banana	cytosol	66.87	64.74
Bra026457.1-P	Field mustard	cytosol	64.18	64.37
CDX94361	Canola	cytosol	64.18	64.37
CDY68466	Canola	cytosol	63.88	64.26
TraesCS3B01G238400.1	Wheat	cytosol, plastid, vacuole	38.81	54.85
TraesCS3B01G280800.1	Wheat	cytosol, mitochondrion, plastid	51.64	51.34
TraesCS5B01G299100.1	Wheat	plastid	36.12	38.05
TraesCS1B01G459400.1	Wheat	cytosol	34.63	32.77
TraesCS4B01G211000.1	Wheat	plastid	29.55	29.55
TraesCS3B01G070700.1	Wheat	cytosol, mitochondrion, peroxisome	28.66	29.18
TraesCS3B01G211500.1	Wheat	golgi	29.85	25.71
TraesCS6B01G210000.1	Wheat	plastid	28.36	22.14
TraesCS1B01G135400.1	Wheat	cytosol	27.16	22.09
TraesCS3B01G493000.1	Wheat	cytosol	26.57	21.98
TraesCS7B01G401600.1	Wheat	cytosol	27.76	21.93
TraesCS4B01G306400.1	Wheat	peroxisome	26.27	20.95
TraesCS7B01G138400.1	Wheat	cytosol	22.99	20.7
TraesCS5B01G274300.1	Wheat	cytosol	22.69	19.74
TraesCS7B01G278000.1	Wheat	cytosol, plastid	29.85	19.42

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150
GO:GO:0015228	GO:GO:0016020	GO:GO:0055085	GO:GO:1990559	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF245	SUPFAM:SSF103506	EnsemblPlantsGene:TraesCS6B01G231800	EnsemblPlants:TraesCS6B01G231800.3	SEG:seg

Description

No Description!

Coordinates

chr6B:-:384961872..384965687

Molecular Weight (calculated)

36424.5 Da

IEP (calculated)

10.002

GRAVY (calculated)

0.056

Length

335 amino acids

Sequence
(BLAST)

001: MEAAERGGGA LPLAVRELIA GGVAGGVAKS AVAPLERVKI LLQTRRAEFR GSGLVGSFRT IYQTEGPLGF YRGNGAGVAR IVPYAALHYM AYEEYRRWII
101: LGFPNVEQGP VLDLVAGSIA GGTAVVSTYP LDLVRTKLAY QLQVKGAVNL SLRESKPSEQ VYKGILDCVK TIYRQNGLKG LYRGMAPSLY GIFPYSGLKF
201: YFYEKMKTHV PEEHRKDIIP KLACGSVAGL LGQTITYPLD VVRRQMQVQA FSSSNLMKGK GTFGSLVMIA KYQGWKQLFS GLSINYLKVV PSVAIGFTVY
301: DSMKDWLNVP SREQAAVVVP VLSEDGSNAA PVHSS

Best Arabidopsis Sequence Match ( AT1G14560.1 )
(BLAST)

001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A

Arabidopsis Description

COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.