Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g008770.1.1 | Tomato | extracellular | 75.37 | 76.04 |
| PGSC0003DMT400000910 | Potato | cytosol | 75.37 | 75.15 |
| CDX94361 | Canola | cytosol | 70.97 | 72.46 |
| CDY68466 | Canola | cytosol | 70.67 | 72.37 |
| Bra026457.1-P | Field mustard | cytosol | 70.67 | 72.16 |
| AT4G26180.1 | Thale cress | cytosol | 69.79 | 71.9 |
| KRH49045 | Soybean | cytosol | 68.04 | 71.83 |
| GSMUA_Achr10P... | Banana | cytosol | 72.14 | 70.89 |
| TraesCS6D01G176300.3 | Wheat | cytosol | 67.45 | 68.66 |
| TraesCS6B01G231800.3 | Wheat | cytosol | 67.45 | 68.66 |
| KXG29836 | Sorghum | cytosol, mitochondrion, plastid | 67.45 | 68.45 |
| TraesCS6A01G187900.2 | Wheat | cytosol | 67.16 | 68.36 |
| HORVU6Hr1G042080.7 | Barley | cytosol | 66.86 | 67.86 |
| Zm00001d016299_P001 | Maize | cytosol, mitochondrion, plastid | 66.57 | 67.76 |
| TraesCS7A01G061900.2 | Wheat | cytosol | 64.52 | 65.67 |
| TraesCS7D01G056700.1 | Wheat | cytosol | 65.98 | 65.6 |
| GSMUA_Achr7P09310_001 | Banana | cytosol | 66.28 | 65.32 |
| VIT_04s0008g01060.t01 | Wine grape | cytosol | 58.65 | 58.14 |
| TraesCS4A01G428000.1 | Wheat | mitochondrion | 64.81 | 57.4 |
| Os02t0226300-00 | Rice | cytosol, mitochondrion, plastid | 59.24 | 56.58 |
| TraesCS4A01G427000.1 | Wheat | mitochondrion | 59.24 | 54.01 |
| VIT_02s0025g01180.t01 | Wine grape | cytosol | 34.6 | 33.33 |
| VIT_15s0046g01290.t01 | Wine grape | cytosol | 33.14 | 31.92 |
| VIT_08s0007g01280.t01 | Wine grape | cytosol | 29.62 | 30.06 |
| VIT_13s0019g02440.t01 | Wine grape | cytosol | 30.5 | 28.81 |
| VIT_10s0042g01030.t01 | Wine grape | cytosol | 10.26 | 28.46 |
| VIT_05s0020g01380.t01 | Wine grape | cytosol | 24.93 | 25.76 |
| VIT_08s0007g02230.t01 | Wine grape | cytosol, mitochondrion, plastid | 28.74 | 25.72 |
| VIT_04s0008g05240.t01 | Wine grape | cytosol | 29.91 | 25.69 |
| VIT_11s0016g05110.t01 | Wine grape | cytosol | 26.69 | 22.75 |
| VIT_00s0665g00020.t01 | Wine grape | plastid | 27.27 | 22.52 |
| VIT_09s0054g00790.t01 | Wine grape | cytosol | 21.99 | 21.07 |
| VIT_18s0001g05620.t01 | Wine grape | cytosol | 26.98 | 20.77 |
| VIT_14s0068g00890.t01 | Wine grape | cytosol | 28.45 | 19.84 |
| VIT_17s0000g00030.t01 | Wine grape | plastid | 30.5 | 18.98 |
Protein Annotations
| Gene3D:1.50.40.10 | EntrezGene:100254293 | wikigene:100254293 | MapMan:24.2.13 | ProteinID:CCB51460 | ProteinID:CCB51460.1 |
| UniProt:F6HGR6 | EMBL:FN595756 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006810 | GO:GO:0006839 |
| GO:GO:0008150 | GO:GO:0015217 | GO:GO:0015228 | GO:GO:0015866 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0035349 | GO:GO:0055085 | GO:GO:0080121 | GO:GO:0080122 | InterPro:Graves_DC | InterPro:IPR018108 |
| InterPro:IPR023395 | EntrezGene:LOC100254293 | wikigene:LOC100254293 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
| PFAM:PF00153 | PRINTS:PR00926 | PRINTS:PR00928 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF245 |
| SUPFAM:SSF103506 | UniParc:UPI00015C8B41 | ArrayExpress:VIT_11s0016g02470 | EnsemblPlantsGene:VIT_11s0016g02470 | EnsemblPlants:VIT_11s0016g02470.t01 | RefSeq:XP_002279837 |
| RefSeq:XP_002279837.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:1980374..1983937
Molecular Weight (calculated)
37838.3 Da
IEP (calculated)
10.174
GRAVY (calculated)
-0.038
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKNREGGER GMLLDGLRDS MPVYVKELVA GGVAGGFAKT MVAPLERVKI LFQTRKAEFQ SIGLLGSFRK IAKTEGVLGF YRGNGASVAR IVPYAALHYM
101: AYEQYRRWII LNFPDIRRGP VLDLMAGSFA GGTAVLFTYP LDLVRTKLAY QVVGSTKLNI KGIVHAEQAY RGILDCFSKT YREAGVRGLY RGGAPALYGI
201: FPYSGLKFYF YEEMKSHVPE KHKKDITVKL ACGSVAGLLG QTLTYPLDVV RRQMQVQRLS ASHIGDVKGT METLVSIAQT QGWKQLFSGL SINYLKVVPS
301: VAIGFTVYDI MKSWLQVPSR DDNLIEVVTN KRNSQPSSLH S
101: AYEQYRRWII LNFPDIRRGP VLDLMAGSFA GGTAVLFTYP LDLVRTKLAY QVVGSTKLNI KGIVHAEQAY RGILDCFSKT YREAGVRGLY RGGAPALYGI
201: FPYSGLKFYF YEEMKSHVPE KHKKDITVKL ACGSVAGLLG QTLTYPLDVV RRQMQVQRLS ASHIGDVKGT METLVSIAQT QGWKQLFSGL SINYLKVVPS
301: VAIGFTVYDI MKSWLQVPSR DDNLIEVVTN KRNSQPSSLH S
001: MAEGEEKNGI IDSIPLFAKE LIAGGVTGGI AKTAVAPLER IKILFQTRRD EFKRIGLVGS INKIGKTEGL MGFYRGNGAS VARIVPYAAL HYMAYEEYRR
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK TQVKAIPVEQ IIYRGIVDCF SRTYRESGAR GLYRGVAPSL YGIFPYAGLK
201: FYFYEEMKRH VPPEHKQDIS LKLVCGSVAG LLGQTLTYPL DVVRRQMQVE RLYSAVKEET RRGTMQTLFK IAREEGWKQL FSGLSINYLK VVPSVAIGFT
301: VYDIMKLHLR VPPREEPEAE AVTTRKRKVF T
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK TQVKAIPVEQ IIYRGIVDCF SRTYRESGAR GLYRGVAPSL YGIFPYAGLK
201: FYFYEEMKRH VPPEHKQDIS LKLVCGSVAG LLGQTLTYPL DVVRRQMQVE RLYSAVKEET RRGTMQTLFK IAREEGWKQL FSGLSINYLK VVPSVAIGFT
301: VYDIMKLHLR VPPREEPEAE AVTTRKRKVF T
Arabidopsis Description
COAC2Mitochondrial carrier protein CoAc2 [Source:UniProtKB/Swiss-Prot;Acc:F4JU70]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.