Factsheet for VIT_18s0001g05620.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	56.88	84.85
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	56.21	83.56
Zm00001d052515_P001	Maize	cytosol	26.86	81.51
Zm00001d009318_P001	Maize	cytosol	20.77	81.42
Bra031891.1-P	Field mustard	cytosol	48.76	80.0
Zm00001d028008_P001	Maize	mitochondrion	48.31	78.97
Zm00001d014331_P001	Maize	cytosol	27.99	73.81
KRH62352	Soybean	cytosol, peroxisome, plastid	69.3	73.8
GSMUA_Achr2P14780_001	Banana	mitochondrion	57.56	73.7
KRH53070	Soybean	cytosol, peroxisome, plasma membrane	68.62	73.08
HORVU4Hr1G078650.2	Barley	peroxisome	65.46	69.38
Os03t0191100-01	Rice	mitochondrion, peroxisome, plastid	65.24	68.65
TraesCS4D01G304600.1	Wheat	peroxisome	65.01	68.57
TraesCS4B01G306400.1	Wheat	peroxisome	64.79	68.33
CDY31292	Canola	cytosol	53.95	68.29
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	65.01	68.09
Zm00001d028009_P001	Maize	peroxisome	64.33	67.06
KXG39987	Sorghum	peroxisome	64.79	66.9
CDX79251	Canola	plastid	60.05	66.83
CDX68026	Canola	plastid	59.82	66.75
Bra003653.1-P	Field mustard	plastid	59.59	66.5
AT5G64970.1	Thale cress	cytosol, mitochondrion, plastid	63.88	66.12
VIT_00s0665g00020.t01	Wine grape	plastid	61.63	66.1
VIT_10s0042g01030.t01	Wine grape	cytosol	18.28	65.85
Solyc04g074130.2.1	Tomato	cytosol	64.33	65.82
PGSC0003DMT400016387	Potato	cytosol	64.33	65.82
CDY14527	Canola	plastid	61.4	65.23
CDY08834	Canola	plastid	61.4	65.07
CDX97455	Canola	plastid	22.12	64.9
Zm00001d048218_P001	Maize	endoplasmic reticulum	63.43	64.9
Bra024342.1-P	Field mustard	plastid	61.17	64.83
AT1G78180.1	Thale cress	plastid	60.5	64.11
CDY33993	Canola	plastid	50.11	62.18
Zm00001d014170_P001	Maize	cytosol	23.93	55.21
CDY39471	Canola	cytosol	38.15	42.14
VIT_11s0016g05110.t01	Wine grape	cytosol	26.64	29.5
VIT_02s0025g01180.t01	Wine grape	cytosol	23.02	28.81
VIT_04s0008g05240.t01	Wine grape	cytosol	25.28	28.21
VIT_15s0046g01290.t01	Wine grape	cytosol	22.12	27.68
VIT_08s0007g01280.t01	Wine grape	cytosol	20.54	27.08
VIT_11s0016g02470.t01	Wine grape	cytosol	20.77	26.98
VIT_04s0008g01060.t01	Wine grape	cytosol	20.54	26.45
VIT_13s0019g02440.t01	Wine grape	cytosol	20.77	25.48
VIT_08s0007g02230.t01	Wine grape	cytosol, mitochondrion, plastid	21.9	25.46
VIT_05s0020g01380.t01	Wine grape	cytosol	18.51	24.85
VIT_09s0054g00790.t01	Wine grape	cytosol	18.28	22.75
VIT_14s0068g00890.t01	Wine grape	cytosol	19.86	18.0
VIT_17s0000g00030.t01	Wine grape	plastid	21.67	17.52

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100255796	wikigene:100255796	MapMan:24.2.13	ProteinID:CCB45569	ProteinID:CCB45569.1
UniProt:F6H0Q0	EMBL:FN595227	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR018108
InterPro:IPR023395	EntrezGene:LOC100255796	wikigene:LOC100255796	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF339	SUPFAM:SSF103506
UniParc:UPI0001985406	ArrayExpress:VIT_18s0001g05620	EnsemblPlantsGene:VIT_18s0001g05620	EnsemblPlants:VIT_18s0001g05620.t01	unigene:Vvi.22534	RefSeq:XP_002284152
RefSeq:XP_002284152.2	RefSeq:XP_002284152.3	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr18:+:4399508..4405646

Molecular Weight (calculated)

48411.5 Da

IEP (calculated)

8.730

GRAVY (calculated)

0.067

Length

443 amino acids

Sequence
(BLAST)

001: MPGLEVWFRD WISHEQSQIL VSDPDSVLFA NGGLFLEPTI PSSFVHLISL RSSSTGVSSS FDCSSVHRRK QVVLGGCRRE RRVPEAFGGG FLSVSLRSDG
101: FAQESTGCLV RNGDKGSEEA ARFQGGNVVV EEGEKQDEVR VGGTSAMNTT KHLWAGALAA MVSRTFVAPL ERLKLEYIVR GEQKHLFELI KTIASSQGLR
201: GFWKGNFVNI LRTAPFKAVN FYAYDTYRKQ LLKFSGNEET TNFERFIAGA AAGITATILC LPLDTIRTKM VAPGGEALGG VIGTFRHMIQ TEGFFSLYKG
301: LVPSIISMAP SGAVFYGVYD ILKSAYLHSP EGRKRIQNMS QQGQELNVLD QLELGPIRTL LYGAVAGACA EAATYPFEVV RRQLQLQVQA TKLSALATCV
401: KIVEHGGVPA LYAGLIPSLL QVLPSASISY FVYEFMKIVL KVE

Best Arabidopsis Sequence Match ( AT5G64970.1 )
(BLAST)

001: MRGLDRWIAE AIRSESLDHN GQIICGGLFL EESLPSSSVS FLSSKDCSVN SCRFSQKSSF LKFRRRNGTR EPLFLSVSLS INESNGEEEE GEGYNGQNGF
101: KSEKGSVLIG GGQESKEKRR VKENGAGALN TTKHLWAGAF AAMVSRTCIA PLERMKLEYI VRGEQGNLLE LIQRIATNEG IRGFWKGNLV NILRTAPFKS
201: INFYAYDTYR GQLLKLSGNE ETTNFERFVA GAAAGVTASL LCLPLDTIRT VMVAPGGEAL GGVVGAFRHM IQTEGFFSLY KGLVPSLVSM APSGAVFYGV
301: YDILKSAYLH TPEGKKRLEH MKQEGEELNA FDQLELGPMR TLLYGAIAGA CSEAATYPFE VVRRRLQMQS HAKRLSAVAT CVKIIEQGGV PALYAGLIPS
401: LLQVLPSAAI SYFVYEFMKV VLKVESSA

Arabidopsis Description

Probable mitochondrial adenine nucleotide transporter BTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV81]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.