Factsheet for PGSC0003DMT400016387

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g074130.2.1	Tomato	cytosol	96.54	96.54
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	54.5	79.46
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	53.35	77.52
Bra031891.1-P	Field mustard	cytosol	48.04	77.04
PGSC0003DMT400004751	Potato	mitochondrion	28.18	76.25
Zm00001d052515_P001	Maize	cytosol	24.48	72.6
Zm00001d009318_P001	Maize	cytosol	18.94	72.57
Zm00001d028008_P001	Maize	mitochondrion	45.03	71.96
GSMUA_Achr2P14780_001	Banana	mitochondrion	54.5	68.21
KRH62352	Soybean	cytosol, peroxisome, plastid	63.74	66.35
Zm00001d014331_P001	Maize	cytosol	25.64	66.07
CDY31292	Canola	cytosol	52.89	65.43
KRH53070	Soybean	cytosol, peroxisome, plasma membrane	62.82	65.38
VIT_18s0001g05620.t01	Wine grape	cytosol	65.82	64.33
CDY14527	Canola	plastid	61.89	64.27
CDY08834	Canola	plastid	61.89	64.11
Bra024342.1-P	Field mustard	plastid	61.66	63.88
CDX68026	Canola	plastid	58.43	63.73
Bra003653.1-P	Field mustard	plastid	58.2	63.48
AT5G64970.1	Thale cress	cytosol, mitochondrion, plastid	62.36	63.08
CDX79251	Canola	plastid	57.97	63.07
CDX97455	Canola	plastid	21.94	62.91
HORVU4Hr1G078650.2	Barley	peroxisome	59.58	61.72
PGSC0003DMT400043297	Potato	cytosol, plastid	59.82	61.52
TraesCS4D01G304600.1	Wheat	peroxisome	59.58	61.43
TraesCS4B01G306400.1	Wheat	peroxisome	59.58	61.43
AT1G78180.1	Thale cress	plastid	59.12	61.24
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	59.58	60.99
Os03t0191100-01	Rice	mitochondrion, peroxisome, plastid	58.66	60.33
Zm00001d028009_P001	Maize	peroxisome	58.66	59.76
CDY33993	Canola	plastid	49.19	59.66
KXG39987	Sorghum	peroxisome	58.66	59.21
Zm00001d048218_P001	Maize	endoplasmic reticulum	57.74	57.74
Zm00001d014170_P001	Maize	cytosol	22.4	50.52
CDY39471	Canola	cytosol	37.41	40.4
PGSC0003DMT400074454	Potato	plastid	13.16	31.84
PGSC0003DMT400049872	Potato	cytosol	23.56	28.73
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	26.1	28.39
PGSC0003DMT400021172	Potato	plastid	21.02	27.08
PGSC0003DMT400000597	Potato	cytosol	22.17	27.04
PGSC0003DMT400062351	Potato	cytosol	21.25	26.14
PGSC0003DMT400030778	Potato	cytosol, peroxisome, plastid	22.4	25.53
PGSC0003DMT400000910	Potato	cytosol	19.86	25.15
PGSC0003DMT400023766	Potato	cytosol	18.71	22.88
PGSC0003DMT400087691	Potato	mitochondrion	8.78	22.75
PGSC0003DMT400036927	Potato	cytosol	23.33	20.65

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:102579513	MapMan:24.2.13	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	UniProt:M1A7L3
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	EnsemblPlantsGene:PGSC0003DMG400006405	PGSC:PGSC0003DMG400006405
EnsemblPlants:PGSC0003DMT400016387	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF339	SUPFAM:SSF103506
UniParc:UPI00029566B2	RefSeq:XP_006364854.1	SEG:seg	:	:	:

Description

Protein brittle-1, chloroplast [Source:PGSC_GENE;Acc:PGSC0003DMG400006405]

Coordinates

chr4:+:63452294..63460122

Molecular Weight (calculated)

47089.2 Da

IEP (calculated)

9.741

GRAVY (calculated)

0.055

Length

433 amino acids

Sequence
(BLAST)

001: MTGVHNIWFK HLESLTLVEN PDTILFSGGL FIEPLIPSSI TNNFLKISSI DDSSELHSPF SRRSGPIFRR EKKSVHAGFG GNFLCLSLSV KKNTEVVGNS
101: SECLLSNGDE SSKVEESSDG NGDVKKRNIG LRGRGAMNTS KHLWAGAVAA MVSRTVVAPL ERLKLEYIVR GEQKHLSELI KTIAATQGLR GFWKGNLVNI
201: LRTAPFKAVN FCAFDTYRKQ LLRLSGNEET TNIERFVAGA AAGVTATVMC LPLDTIRTKL VARGGEALGG VVGAFQHVIR TEGFFSLYKG LVPSILSMAP
301: AAAVFYGVYD ILKSAYLRSP EGRKRIEYMK NQGAELNAFD QLELGPMRTL LHGAIAGACA EAATYPFEVI RRHLQLQGRA SKLSALATCA KIVEQGGVPA
401: LYAGLIPSLL QVLPSASISY FVYEFMKIVL KAE

Best Arabidopsis Sequence Match ( AT5G64970.1 )
(BLAST)

001: MRGLDRWIAE AIRSESLDHN GQIICGGLFL EESLPSSSVS FLSSKDCSVN SCRFSQKSSF LKFRRRNGTR EPLFLSVSLS INESNGEEEE GEGYNGQNGF
101: KSEKGSVLIG GGQESKEKRR VKENGAGALN TTKHLWAGAF AAMVSRTCIA PLERMKLEYI VRGEQGNLLE LIQRIATNEG IRGFWKGNLV NILRTAPFKS
201: INFYAYDTYR GQLLKLSGNE ETTNFERFVA GAAAGVTASL LCLPLDTIRT VMVAPGGEAL GGVVGAFRHM IQTEGFFSLY KGLVPSLVSM APSGAVFYGV
301: YDILKSAYLH TPEGKKRLEH MKQEGEELNA FDQLELGPMR TLLYGAIAGA CSEAATYPFE VVRRRLQMQS HAKRLSAVAT CVKIIEQGGV PALYAGLIPS
401: LLQVLPSAAI SYFVYEFMKV VLKVESSA

Arabidopsis Description

Probable mitochondrial adenine nucleotide transporter BTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV81]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.