Factsheet for PGSC0003DMT400049872

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g011670.2.1	Tomato	cytosol	99.72	99.72
PGSC0003DMT400000597	Potato	cytosol	90.7	90.7
KRH47947	Soybean	mitochondrion	87.89	87.89
KRH68888	Soybean	cytosol	85.35	87.83
KRH06509	Soybean	cytosol	87.61	87.61
VIT_15s0046g01290.t01	Wine grape	cytosol	87.04	87.29
KRG97138	Soybean	cytosol	84.51	86.96
CDX74363	Canola	cytosol	84.51	84.99
CDX91877	Canola	cytosol	84.23	84.7
Bra000944.1-P	Field mustard	cytosol	84.23	84.7
CDY11371	Canola	cytosol	80.85	84.66
GSMUA_Achr7P24620_001	Banana	cytosol	85.07	84.59
CDY66909	Canola	cytosol, mitochondrion, plastid	29.01	84.43
Bra007623.1-P	Field mustard	cytosol	80.56	84.37
CDX71722	Canola	cytosol	80.28	84.32
Bra037383.1-P	Field mustard	cytosol	82.54	83.71
CDY48505	Canola	cytosol	82.54	83.71
CDY07175	Canola	cytosol	82.54	83.71
GSMUA_Achr2P06340_001	Banana	cytosol	83.94	83.24
GSMUA_Achr3P32000_001	Banana	cytosol	83.66	83.19
EES20024	Sorghum	cytosol	82.54	82.54
Os05t0585900-01	Rice	cytosol, mitochondrion	82.25	82.25
CDY01954	Canola	mitochondrion	45.63	82.23
HORVU1Hr1G092860.1	Barley	cytosol	80.85	81.07
TraesCS1D01G434000.1	Wheat	cytosol	80.85	81.07
TraesCS1B01G459400.1	Wheat	cytosol	80.85	81.07
TraesCS1A01G425000.1	Wheat	cytosol	80.85	81.07
AT4G01100.2	Thale cress	cytosol	82.25	79.78
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	31.83	73.86
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	58.31	72.89
PGSC0003DMT400074454	Potato	plastid	23.94	47.49
PGSC0003DMT400021172	Potato	plastid	33.52	35.42
PGSC0003DMT400000910	Potato	cytosol	32.96	34.21
PGSC0003DMT400087691	Potato	mitochondrion	14.65	31.14
PGSC0003DMT400062351	Potato	cytosol	30.14	30.4
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	32.11	28.64
PGSC0003DMT400004751	Potato	mitochondrion	12.68	28.12
PGSC0003DMT400030778	Potato	cytosol, peroxisome, plastid	29.01	27.11
PGSC0003DMT400036927	Potato	cytosol	35.21	25.56
PGSC0003DMT400043297	Potato	cytosol, plastid	29.3	24.7
PGSC0003DMT400016387	Potato	cytosol	28.73	23.56
PGSC0003DMT400023766	Potato	cytosol	22.25	22.32

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:102591948	MapMan:24.2.13	ncoils:Coil	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395
UniProt:M1BPG4	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	EnsemblPlantsGene:PGSC0003DMG400019378
PGSC:PGSC0003DMG400019378	EnsemblPlants:PGSC0003DMT400049872	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF648
SUPFAM:SSF103506	UniParc:UPI00029600F2	RefSeq:XP_006358640.1	SEG:seg	:	:

Description

Mitochondrial carrier [Source:PGSC_GENE;Acc:PGSC0003DMG400019378]

Coordinates

chr10:+:5879374..5888322

Molecular Weight (calculated)

38624.1 Da

IEP (calculated)

9.865

GRAVY (calculated)

0.032

Length

355 amino acids

Sequence
(BLAST)

001: MASEDVKAAR DSAVEKIVNL AEEAKLAREE IKPTSHAVLS ICKSLVAGGV AGGVSRTAVA PLERLKILLQ VQNPHNIKYN GTIQGLKYIW RTEGFKGLFK
101: GNGTNCARIV PNSAVKFFSY EQASKGILYL YRQQTGIEDA QLTPLLRLGA GACAGIIAMS ATYPMDMVRG RLTVQTENSP YQYRGMFHAL STVLREEGPR
201: ALYKGWTPSV IGVIPYVGLN FAVYESLKDW LVKTKPFGLV DNSELGVVTR LACGAAAGTV GQTVAYPLDV IRRRMQMVGW SHAASIVTGD GRSKAPLEYT
301: GMIDAFRKTV KYEGVRALYK GLVPNSVKVV PSISIAFVAY EQVKDLLGVE IRISD

Best Arabidopsis Sequence Match ( AT4G01100.1 )
(BLAST)

001: MASEDVKRTE SAAVSTIVNL AEEAREGVKA PSYAFKSICK SLFAGGVAGG VSRTAVAPLE RMKILLQVQN PHNIKYSGTV QGLKHIWRTE GLRGLFKGNG
101: TNCARIVPNS AVKFFSYEQA SNGILYMYRQ RTGNENAQLT PLLRLGAGAT AGIIAMSATY PMDMVRGRLT VQTANSPYQY RGIAHALATV LREEGPRALY
201: RGWLPSVIGV VPYVGLNFSV YESLKDWLVK ENPYGLVENN ELTVVTRLTC GAIAGTVGQT IAYPLDVIRR RMQMVGWKDA SAIVTGEGRS TASLEYTGMV
301: DAFRKTVRHE GFGALYKGLV PNSVKVVPSI AIAFVTYEMV KDVLGVEFRI SD

Arabidopsis Description

ADNT1Adenine nucleotide transporter 1 [Source:UniProtKB/TrEMBL;Acc:F4JHS4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.