Factsheet for VIT_15s0046g01290.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g01180.t01	Wine grape	cytosol	89.55	89.55
KRH47947	Soybean	mitochondrion	89.27	89.01
KRH68888	Soybean	cytosol	86.44	88.7
KRG97138	Soybean	cytosol	85.88	88.12
KRH06509	Soybean	cytosol	87.85	87.61
Solyc10g011670.2.1	Tomato	cytosol	87.57	87.32
PGSC0003DMT400049872	Potato	cytosol	87.29	87.04
CDY11371	Canola	cytosol	83.33	87.02
Bra007623.1-P	Field mustard	cytosol	83.05	86.73
CDX74363	Canola	cytosol	86.16	86.4
CDX71722	Canola	cytosol	82.49	86.39
GSMUA_Achr7P24620_001	Banana	cytosol	87.01	86.27
Bra000944.1-P	Field mustard	cytosol	85.88	86.12
CDX91877	Canola	cytosol	85.88	86.12
CDY66909	Canola	cytosol, mitochondrion, plastid	29.66	86.07
CDY48505	Canola	cytosol	84.75	85.71
CDY07175	Canola	cytosol	84.75	85.71
Bra037383.1-P	Field mustard	cytosol	84.75	85.71
GSMUA_Achr2P06340_001	Banana	cytosol	86.16	85.2
GSMUA_Achr3P32000_001	Banana	cytosol	85.88	85.15
PGSC0003DMT400000597	Potato	cytosol	85.03	84.79
Solyc01g095570.2.1	Tomato	cytosol	85.03	84.79
CDY01954	Canola	mitochondrion	46.89	84.26
EES20024	Sorghum	cytosol	83.05	82.82
Os05t0585900-01	Rice	cytosol, mitochondrion	82.77	82.54
HORVU1Hr1G092860.1	Barley	cytosol	82.2	82.2
TraesCS1A01G425000.1	Wheat	cytosol	82.2	82.2
TraesCS1B01G459400.1	Wheat	cytosol	82.2	82.2
TraesCS1D01G434000.1	Wheat	cytosol	82.2	82.2
AT4G01100.2	Thale cress	cytosol	84.46	81.69
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	33.33	77.12
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	58.76	73.24
VIT_04s0008g01060.t01	Wine grape	cytosol	34.18	35.17
VIT_11s0016g02470.t01	Wine grape	cytosol	31.92	33.14
VIT_08s0007g01280.t01	Wine grape	cytosol	31.36	33.04
VIT_13s0019g02440.t01	Wine grape	cytosol	31.92	31.3
VIT_05s0020g01380.t01	Wine grape	cytosol	29.1	31.21
VIT_08s0007g02230.t01	Wine grape	cytosol, mitochondrion, plastid	29.38	27.3
VIT_04s0008g05240.t01	Wine grape	cytosol	29.66	26.45
VIT_14s0068g00890.t01	Wine grape	cytosol	36.44	26.38
VIT_11s0016g05110.t01	Wine grape	cytosol	29.66	26.25
VIT_10s0042g01030.t01	Wine grape	cytosol	8.47	24.39
VIT_00s0665g00020.t01	Wine grape	plastid	27.68	23.73
VIT_17s0000g00030.t01	Wine grape	plastid	36.72	23.72
VIT_09s0054g00790.t01	Wine grape	cytosol	22.6	22.47
VIT_18s0001g05620.t01	Wine grape	cytosol	27.68	22.12

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100256750	wikigene:100256750	MapMan:24.2.13	EMBL:AM427150	ProteinID:CAN60251
ProteinID:CAN60251.1	ProteinID:CBI40481	ProteinID:CBI40481.3	UniProt:D7UCL6	EMBL:FN596755	GO:GO:0003674
GO:GO:0005215	GO:GO:0005347	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0005773	GO:GO:0005774	GO:GO:0006091	GO:GO:0006810
GO:GO:0006839	GO:GO:0008150	GO:GO:0008152	GO:GO:0009060	GO:GO:0009536	GO:GO:0009987
GO:GO:0015217	GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	GO:GO:0080121	GO:GO:0080122	InterPro:IPR018108	InterPro:IPR023395	EntrezGene:LOC100256750
wikigene:LOC100256750	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF648	SUPFAM:SSF103506	TIGR:TC54363	TIGR:TC64973
UniParc:UPI00015CB206	ArrayExpress:VIT_15s0046g01290	EnsemblPlantsGene:VIT_15s0046g01290	EnsemblPlants:VIT_15s0046g01290.t01	unigene:Vvi.3223	RefSeq:XP_002280675
RefSeq:XP_002280675.1	:	:	:	:	:

Description

No Description!

Coordinates

chr15:+:18317677..18324770

Molecular Weight (calculated)

38339.7 Da

IEP (calculated)

9.870

GRAVY (calculated)

0.046

Length

354 amino acids

Sequence
(BLAST)

001: MASEDVKPSE SAVTTIVNLA EEAKLAREGV KAPSYAILSV AKSLTAGGVA GGVSRTAVAP LERLKILLQV QNPHNIKYNG TIQGLKYIWK TEGFRGLFKG
101: NGTNCARIIP NSAVKFFSYE QASKGILYLY QQQTGNEDAQ LTPLLRLGAG ACAGIIAMSA TYPMDMVRGR LTVQTENSPY QYRGMFHALS TVLRQEGPRA
201: LYKGWLPSVI GVVPYVGLNF AVYESLKDWL IKSKAFGLVH DNELGVTTRL ACGAAAGTIG QTVAYPLDVI RRRMQMIGWK DAASIVTGEG RSKAPIEYTG
301: MVDAFRKTVR HEGIGALYKG LVPNSVKVVP SIALAFVTYE MVKDILGVEI RISD

Best Arabidopsis Sequence Match ( AT4G01100.1 )
(BLAST)

001: MASEDVKRTE SAAVSTIVNL AEEAREGVKA PSYAFKSICK SLFAGGVAGG VSRTAVAPLE RMKILLQVQN PHNIKYSGTV QGLKHIWRTE GLRGLFKGNG
101: TNCARIVPNS AVKFFSYEQA SNGILYMYRQ RTGNENAQLT PLLRLGAGAT AGIIAMSATY PMDMVRGRLT VQTANSPYQY RGIAHALATV LREEGPRALY
201: RGWLPSVIGV VPYVGLNFSV YESLKDWLVK ENPYGLVENN ELTVVTRLTC GAIAGTVGQT IAYPLDVIRR RMQMVGWKDA SAIVTGEGRS TASLEYTGMV
301: DAFRKTVRHE GFGALYKGLV PNSVKVVPSI AIAFVTYEMV KDVLGVEFRI SD

Arabidopsis Description

ADNT1Adenine nucleotide transporter 1 [Source:UniProtKB/TrEMBL;Acc:F4JHS4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.