Factsheet for VIT_14s0068g00890.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94737	Soybean	cytosol	77.91	79.87
GSMUA_AchrUn_...	Banana	cytosol	83.64	79.57
KRH06795	Soybean	cytosol	76.69	79.28
GSMUA_Achr8P26070_001	Banana	cytosol	82.0	77.86
KRH70079	Soybean	cytosol	75.46	76.4
GSMUA_Achr5P05990_001	Banana	cytosol	78.94	75.1
VIT_17s0000g00030.t01	Wine grape	plastid	79.96	71.35
EER88619	Sorghum	cytosol, plastid	74.64	70.46
Os06t0604500-01	Rice	nucleus	74.03	70.29
TraesCS7B01G278000.1	Wheat	cytosol, plastid	73.82	70.1
TraesCS7A01G376600.1	Wheat	cytosol, plastid	74.03	69.62
TraesCS7D01G372900.1	Wheat	cytosol, plastid	73.82	69.56
HORVU7Hr1G090020.9	Barley	mitochondrion	73.62	68.83
KXG29744	Sorghum	plastid	72.8	67.42
Zm00001d053640_P001	Maize	plasma membrane	71.57	66.16
Zm00001d046509_P002	Maize	plastid	74.03	65.58
Os02t0201500-00	Rice	plastid	73.62	62.07
VIT_02s0025g01180.t01	Wine grape	cytosol	26.79	37.01
VIT_15s0046g01290.t01	Wine grape	cytosol	26.38	36.44
VIT_08s0007g01280.t01	Wine grape	cytosol	21.27	30.95
VIT_04s0008g01060.t01	Wine grape	cytosol	21.27	30.23
VIT_13s0019g02440.t01	Wine grape	cytosol	21.68	29.36
VIT_11s0016g02470.t01	Wine grape	cytosol	19.84	28.45
VIT_05s0020g01380.t01	Wine grape	cytosol	18.81	27.88
VIT_04s0008g05240.t01	Wine grape	cytosol	22.09	27.2
VIT_11s0016g05110.t01	Wine grape	cytosol	21.47	26.25
VIT_10s0042g01030.t01	Wine grape	cytosol	6.34	25.2
VIT_08s0007g02230.t01	Wine grape	cytosol, mitochondrion, plastid	18.4	23.62
VIT_09s0054g00790.t01	Wine grape	cytosol	16.97	23.31
VIT_00s0665g00020.t01	Wine grape	plastid	18.2	21.55
VIT_18s0001g05620.t01	Wine grape	cytosol	18.0	19.86

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.50.40.10	EntrezGene:100253168	wikigene:100253168	MapMan:24.2.13	ProteinID:CBI21256
ProteinID:CBI21256.3	UniProt:D7SVF7	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EMBL:FN595232
GO:GO:0003674	GO:GO:0005215	GO:GO:0005347	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810
GO:GO:0006839	GO:GO:0008150	GO:GO:0015217	GO:GO:0015866	GO:GO:0015867	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR002048	InterPro:IPR018108	InterPro:IPR023395	EntrezGene:LOC100253168
wikigene:LOC100253168	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFAM:PF13202
PFAM:PF13499	PRINTS:PR00926	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS50920	PANTHER:PTHR24089
PANTHER:PTHR24089:SF454	SMART:SM00054	SUPFAM:SSF103506	SUPFAM:SSF47473	TIGR:TC59996	TIGR:TC61315
UniParc:UPI0001984A29	ArrayExpress:VIT_14s0068g00890	EnsemblPlantsGene:VIT_14s0068g00890	EnsemblPlants:VIT_14s0068g00890.t01	unigene:Vvi.14176	RefSeq:XP_002277297
RefSeq:XP_002277297.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr14:-:24652258..24655846

Molecular Weight (calculated)

54466.7 Da

IEP (calculated)

6.262

GRAVY (calculated)

-0.127

Length

489 amino acids

Sequence
(BLAST)

001: MEGQRSSGCN PVRKPGPVSM EHVLLALRET EEQREQRIRS LFNFFDAANA GYLDYAQIEA GLSALCIPAE YKYANDLLNV CDANRDGRVD YQEFRRYMDD
101: KELELYRIFQ AIDVEHNGCI SPEGLFDALV RAGIKIDDEE LARFVERVDK DNNGVITFEE WRDFLLLCPH EATIENIYHY LERVCLVDIG EQTVIPEGIS
201: KHVHPSRYLI AGGVAGATSR TATAPLDRLK VVLQVQTTEA RILPALKDIW KEGRFLGFFR GNGLNVMKVA PESAIRFYTY EMLKTFVVNA KGGGDKAEIG
301: IMGRLFSGGL AGAVAQTAIY PMDLVKTRLQ TCALEGGKVP NLGALSKDIL VHEGPRAFYR GLVPSLIGII PYAGIDLTAY ESLKDLSKTY IFHDTEPGPL
401: LQLGCGTISG ALGATCVYPL QVIRTRMQAQ PTNKADAYKG MSDVFRKTFQ HEGFRGFYKG LFPNLLKVVP SASITYLVYE TMKKSLELD

Best Arabidopsis Sequence Match ( AT5G51050.1 )
(BLAST)

001: MSTTHVGLPT KMEATKSSKQ NCCNPVKKPG PVSIDHVLLA LRETREERDL RIRSLFSFFD SENVGYLDCA QIEKGLCALQ IPSGYKYAKE LFRVCDANRD
101: GRVDYHEFRR YMDDKELELY RIFQAIDVEH NGCISPEGLW DSLVKAGIEI KDEELARFVE HVDKDNDGII MFEEWRDFLL LYPHEATIEN IYHHWERVCL
201: VDIGEQAVIP EGISKHIKRS NYFIAGGIAG AASRTATAPL DRLKVLLQIQ KTDARIREAI KLIWKQGGVR GFFRGNGLNI VKVAPESAIK FYAYELFKNA
301: IGENMGEDKA DIGTTVRLFA GGMAGAVAQA SIYPLDLVKT RLQTYTSQAG VAVPRLGTLT KDILVHEGPR AFYKGLFPSL LGIIPYAGID LAAYETLKDL
401: SRTYILQDAE PGPLVQLGCG TISGALGATC VYPLQVVRTR MQAERARTSM SGVFRRTISE EGYRALYKGL LPNLLKVVPA ASITYMVYEA MKKSLELD

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT5G51050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.