Factsheet for GSMUA_Achr5P05990_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	88.13	88.13
GSMUA_Achr8P26070_001	Banana	cytosol	87.16	86.99
VIT_14s0068g00890.t01	Wine grape	cytosol	75.1	78.94
KRH41046	Soybean	cytosol	72.18	75.41
KRG94737	Soybean	cytosol	69.84	75.26
KRH59718	Soybean	cytosol	73.15	75.2
KRH06795	Soybean	cytosol	68.68	74.63
PGSC0003DMT400074454	Potato	plastid	25.88	74.3
PGSC0003DMT400036927	Potato	cytosol	70.62	74.23
KRH63894	Soybean	cytosol	67.51	74.15
Solyc06g068720.2.1	Tomato	cytosol	71.98	74.0
EER88619	Sorghum	cytosol, plastid	74.51	73.94
CDY14050	Canola	cytosol	67.32	73.93
KRH54061	Soybean	cytosol	68.29	73.74
Solyc03g118090.2.1	Tomato	cytosol	71.79	73.51
Os06t0604500-01	Rice	nucleus	73.54	73.4
CDY55175	Canola	cytosol	66.73	73.29
Bra028702.1-P	Field mustard	cytosol	66.73	73.29
AT5G51050.1	Thale cress	cytosol	70.82	73.09
VIT_17s0000g00030.t01	Wine grape	plastid	77.82	72.99
TraesCS7B01G278000.1	Wheat	cytosol, plastid	72.57	72.43
Bra035722.1-P	Field mustard	cytosol	70.04	72.14
TraesCS7A01G376600.1	Wheat	cytosol, plastid	72.96	72.12
TraesCS7D01G372900.1	Wheat	cytosol, plastid	72.76	72.06
CDY05832	Canola	cytosol	70.04	72.0
CDX71683	Canola	cytosol	69.84	71.8
KRH70079	Soybean	cytosol	67.32	71.64
AT5G07320.1	Thale cress	cytosol	66.73	71.61
CDX70028	Canola	cytosol	55.25	71.54
HORVU7Hr1G090020.9	Barley	mitochondrion	72.57	71.32
Bra009271.1-P	Field mustard	cytosol	59.14	70.53
KXG29744	Sorghum	plastid	71.79	69.89
Zm00001d046509_P002	Maize	plastid	74.51	69.38
Zm00001d053640_P001	Maize	plasma membrane	70.82	68.81
AT5G61810.1	Thale cress	cytosol	63.81	68.62
Bra019615.1-P	Field mustard	cytosol	63.03	67.92
CDY00231	Canola	cytosol	63.03	67.92
CDX86953	Canola	cytosol	62.84	67.71
CDX98981	Canola	endoplasmic reticulum, golgi	54.47	65.73
Os02t0201500-00	Rice	plastid	71.98	63.79
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	10.12	33.99
GSMUA_Achr3P32000_001	Banana	cytosol	23.54	33.89
GSMUA_Achr2P06340_001	Banana	cytosol	23.54	33.8
GSMUA_Achr7P24620_001	Banana	cytosol	23.15	33.33
GSMUA_Achr8P02430_001	Banana	cytosol	21.98	32.19
GSMUA_Achr10P...	Banana	cytosol	19.65	29.97
GSMUA_Achr11P...	Banana	extracellular	5.64	28.71
GSMUA_Achr8P26260_001	Banana	cytosol, peroxisome, plastid	18.48	28.11
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	8.37	28.1
GSMUA_Achr6P33950_001	Banana	plastid	21.6	27.75
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	15.95	27.52
GSMUA_Achr7P10070_001	Banana	cytosol	20.62	27.46
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	21.4	27.36
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	14.98	27.11
GSMUA_Achr10P...	Banana	cytosol	18.29	27.09
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	15.37	26.6
GSMUA_Achr8P22520_001	Banana	cytosol	17.12	26.59
GSMUA_Achr7P09310_001	Banana	cytosol	17.51	26.01
GSMUA_Achr7P10000_001	Banana	mitochondrion	11.28	24.89
GSMUA_Achr2P14780_001	Banana	mitochondrion	16.15	23.99
GSMUA_Achr10P...	Banana	mitochondrion	6.23	23.88
GSMUA_Achr9P03630_001	Banana	mitochondrion	17.51	23.87
GSMUA_Achr10P...	Banana	endoplasmic reticulum	19.46	22.37
GSMUA_Achr10P...	Banana	cytosol	16.73	22.11
GSMUA_Achr6P03740_001	Banana	cytosol	14.98	21.27
GSMUA_Achr6P30940_001	Banana	cytosol	14.79	21.17
GSMUA_Achr11P...	Banana	cytosol	4.86	19.84

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.50.40.10	MapMan:24.2.13	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr5G05990_001	EnsemblPlants:GSMUA_Achr5P05990_001	EnsemblPlants:GSMUA_Achr5T05990_001
InterPro:IPR002048	InterPro:IPR018108	InterPro:IPR023395	UniProt:M0SW28	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFAM:PF13202	PFAM:PF13499	PRINTS:PR00926	ScanProsite:PS00018
PFscan:PS50222	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF454	SMART:SM00054	SUPFAM:SSF103506
SUPFAM:SSF47473	UniParc:UPI0002955C73	SEG:seg	:	:	:

Description

Putative Calcium-binding mitochondrial carrier protein SCaMC-1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G05990_001]

Coordinates

chr5:-:4458793..4462533

Molecular Weight (calculated)

57267.0 Da

IEP (calculated)

6.213

GRAVY (calculated)

-0.150

Length

514 amino acids

Sequence
(BLAST)

001: MSGAAKAVEE RSGFSAKMDA APAAEGEQRR RPDGCNPVKK PGPVSMDHVL LALRETGEER EVRVRSLFNF FDAAGVGHLD YAQIDSGLSA LRVPAEYKYA
101: RDLLKVCDAN RDGRVDYQEF RRYMDDKELE LYRIFQAIDV EHNGCILPEE LWDALIKAGI DIDDEELARF VEHVDKDNNG IITFEEWRDF LLLYPHEATI
201: ENIYQYWERV CLVDIGEQAV IPEGISKHVN PSKYLIAGGV AGAASRTATA PLDRLKVALQ VQTTRARILP AIKDIWREGG FLSFFRGNGL NVIKVTPESA
301: IKFYTFEILK DFIVKGKGEE KSNIGASERL IAGGIAGAVS QTVIYPMDLV KTRLQTYACE AGKVPNLAML TRDIWVHEGP RAFYRGIVPS LLGIIPFAGI
401: DLAAYETLKD MSRTYILKNS DPGPLMQLGC GTISSALGAT CVYPLQVIRT RMQAQRTNPS NNYYGMSDVF WRTLKNEGLL GFYKGIIPNL LKVVPAAGIT
501: YLVYETMKKS LSLD

Best Arabidopsis Sequence Match ( AT5G51050.1 )
(BLAST)

001: MSTTHVGLPT KMEATKSSKQ NCCNPVKKPG PVSIDHVLLA LRETREERDL RIRSLFSFFD SENVGYLDCA QIEKGLCALQ IPSGYKYAKE LFRVCDANRD
101: GRVDYHEFRR YMDDKELELY RIFQAIDVEH NGCISPEGLW DSLVKAGIEI KDEELARFVE HVDKDNDGII MFEEWRDFLL LYPHEATIEN IYHHWERVCL
201: VDIGEQAVIP EGISKHIKRS NYFIAGGIAG AASRTATAPL DRLKVLLQIQ KTDARIREAI KLIWKQGGVR GFFRGNGLNI VKVAPESAIK FYAYELFKNA
301: IGENMGEDKA DIGTTVRLFA GGMAGAVAQA SIYPLDLVKT RLQTYTSQAG VAVPRLGTLT KDILVHEGPR AFYKGLFPSL LGIIPYAGID LAAYETLKDL
401: SRTYILQDAE PGPLVQLGCG TISGALGATC VYPLQVVRTR MQAERARTSM SGVFRRTISE EGYRALYKGL LPNLLKVVPA ASITYMVYEA MKKSLELD

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT5G51050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.