Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14050 | Canola | cytosol | 93.74 | 95.94 |
| CDY55175 | Canola | cytosol | 93.53 | 95.73 |
| Bra028702.1-P | Field mustard | cytosol | 93.53 | 95.73 |
| CDX70028 | Canola | cytosol | 77.87 | 93.95 |
| Bra009271.1-P | Field mustard | cytosol | 82.88 | 92.11 |
| CDX98981 | Canola | endoplasmic reticulum, golgi | 75.16 | 84.51 |
| AT5G61810.1 | Thale cress | cytosol | 81.0 | 81.17 |
| KRH41046 | Soybean | cytosol | 74.95 | 72.97 |
| KRH63894 | Soybean | cytosol | 71.19 | 72.86 |
| KRH59718 | Soybean | cytosol | 75.37 | 72.2 |
| KRH54061 | Soybean | cytosol | 71.19 | 71.64 |
| PGSC0003DMT400074454 | Potato | plastid | 26.72 | 71.51 |
| AT5G51050.1 | Thale cress | cytosol | 73.9 | 71.08 |
| PGSC0003DMT400036927 | Potato | cytosol | 71.19 | 69.73 |
| GSMUA_AchrUn_... | Banana | cytosol | 74.53 | 69.46 |
| GSMUA_Achr8P26070_001 | Banana | cytosol | 73.7 | 68.54 |
| Solyc06g068720.2.1 | Tomato | cytosol | 71.19 | 68.2 |
| Solyc03g118090.2.1 | Tomato | cytosol | 71.19 | 67.93 |
| GSMUA_Achr5P05990_001 | Banana | cytosol | 71.61 | 66.73 |
| EER88619 | Sorghum | cytosol, plastid | 70.77 | 65.44 |
| TraesCS7B01G278000.1 | Wheat | cytosol, plastid | 70.35 | 65.44 |
| Os06t0604500-01 | Rice | nucleus | 70.15 | 65.24 |
| TraesCS7D01G372900.1 | Wheat | cytosol, plastid | 70.56 | 65.13 |
| TraesCS7A01G376600.1 | Wheat | cytosol, plastid | 70.56 | 65.0 |
| HORVU7Hr1G090020.9 | Barley | mitochondrion | 70.15 | 64.24 |
| KXG29744 | Sorghum | plastid | 70.15 | 63.64 |
| Zm00001d053640_P001 | Maize | plasma membrane | 70.15 | 63.52 |
| VIT_17s0000g00030.t01 | Wine grape | plastid | 72.23 | 63.14 |
| Zm00001d046509_P002 | Maize | plastid | 69.73 | 60.51 |
| Os02t0201500-00 | Rice | plastid | 69.94 | 57.76 |
| AT4G01100.2 | Thale cress | cytosol | 24.22 | 31.69 |
| AT4G26180.1 | Thale cress | cytosol | 21.5 | 31.12 |
| AT3G55640.4 | Thale cress | plastid | 21.29 | 30.72 |
| AT1G14560.1 | Thale cress | cytosol | 21.09 | 30.51 |
| AT2G37890.1 | Thale cress | cytosol | 20.88 | 29.67 |
| AT3G53940.1 | Thale cress | cytosol | 21.71 | 28.49 |
| AT4G32400.1 | Thale cress | cytosol | 21.92 | 26.79 |
| AT3G51870.1 | Thale cress | plastid | 20.25 | 25.46 |
| AT5G01500.1 | Thale cress | cytosol | 21.29 | 24.58 |
| AT5G48970.1 | Thale cress | cytosol | 16.49 | 23.3 |
| AT3G21390.2 | Thale cress | cytosol | 17.33 | 23.25 |
| AT1G78180.1 | Thale cress | plastid | 19.42 | 22.25 |
| AT5G64970.1 | Thale cress | cytosol, mitochondrion, plastid | 19.21 | 21.5 |
| AT3G20240.1 | Thale cress | cytosol | 15.45 | 21.26 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.50.40.10 | MapMan:24.2.13 | EntrezGene:830623 | UniProt:A0A178U8U1 | ProteinID:AED91136.1 |
| EMBL:AK175228 | ArrayExpress:AT5G07320 | EnsemblPlantsGene:AT5G07320 | RefSeq:AT5G07320 | TAIR:AT5G07320 | RefSeq:AT5G07320-TAIR-G |
| EnsemblPlants:AT5G07320.1 | TAIR:AT5G07320.1 | Unigene:At.51053 | ProteinID:CAB87921.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005347 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 |
| GO:GO:0006810 | GO:GO:0006839 | GO:GO:0008150 | GO:GO:0015114 | GO:GO:0015217 | GO:GO:0015866 |
| GO:GO:0015867 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0035435 | GO:GO:0055085 | GO:GO:0080121 |
| GO:GO:0080122 | InterPro:IPR002048 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier |
| InterPro:Mt_carrier_dom_sf | RefSeq:NP_196349.1 | ProteinID:OAO90090.1 | PFAM:PF00153 | PFAM:PF13202 | PFAM:PF13499 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00926 | ScanProsite:PS00018 | PFscan:PS50222 |
| PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF454 | UniProt:Q9LY28 | SMART:SM00054 | SUPFAM:SSF103506 |
| SUPFAM:SSF47473 | UniParc:UPI000009CB74 | SEG:seg | : | : | : |
Description
Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q9LY28]
Coordinates
chr5:+:2309863..2312346
Molecular Weight (calculated)
53972.7 Da
IEP (calculated)
7.191
GRAVY (calculated)
-0.182
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSKPKNRN PMKKPVSITM EHVLLALRET MDEREIRIRS LFDFFDNSNL GFLDYAQIEK GLASLQIPPE YKYARDLFRV CDANRDGRVD YQEFRRYIDA
101: KELELYRIFQ AIDVEHNGCI LPEELWEALV KAGIEIDDEE LARFVEHVDK DNNGTITFEE WRDFLLLYPH EATLENIYHH WERVCLIDIG EQAVIPDGIS
201: KHVKRSRLLL AGGLAGAVSR TATAPLDRLK VVLQVQRAHA GVLPTIKKIW REDKLMGFFR GNGLNVMKVA PESAIKFCAY EMLKPMIGGE DGDIGTSGRL
301: MAGGMAGALA QTAIYPMDLV KTRLQTCVSE GGKAPKLWKL TKDIWVREGP RAFYKGLFPS LLGIVPYAGI DLAAYETLKD LSRTYILQDT EPGPLIQLSC
401: GMTSGALGAS CVYPLQVVRT RMQADSSKTT MKQEFMNTMK GEGLRGFYRG LLPNLLKVVP AASITYIVYE AMKKNMALD
101: KELELYRIFQ AIDVEHNGCI LPEELWEALV KAGIEIDDEE LARFVEHVDK DNNGTITFEE WRDFLLLYPH EATLENIYHH WERVCLIDIG EQAVIPDGIS
201: KHVKRSRLLL AGGLAGAVSR TATAPLDRLK VVLQVQRAHA GVLPTIKKIW REDKLMGFFR GNGLNVMKVA PESAIKFCAY EMLKPMIGGE DGDIGTSGRL
301: MAGGMAGALA QTAIYPMDLV KTRLQTCVSE GGKAPKLWKL TKDIWVREGP RAFYKGLFPS LLGIVPYAGI DLAAYETLKD LSRTYILQDT EPGPLIQLSC
401: GMTSGALGAS CVYPLQVVRT RMQADSSKTT MKQEFMNTMK GEGLRGFYRG LLPNLLKVVP AASITYIVYE AMKKNMALD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.