Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68841 | Canola | cytosol | 86.22 | 89.66 |
| CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 87.24 | 89.53 |
| Bra011344.1-P | Field mustard | cytosol | 87.24 | 89.53 |
| CDX68843 | Canola | cytosol | 28.83 | 86.26 |
| KRH15889 | Soybean | endoplasmic reticulum | 44.9 | 73.64 |
| Solyc08g061090.2.1 | Tomato | plastid | 69.9 | 68.84 |
| TraesCS7A01G495700.1 | Wheat | cytosol, plastid | 36.99 | 68.72 |
| PGSC0003DMT400053564 | Potato | cytosol, nucleus, plastid | 69.64 | 68.59 |
| VIT_04s0008g05240.t01 | Wine grape | cytosol | 69.39 | 68.51 |
| KRH52458 | Soybean | extracellular | 67.86 | 68.03 |
| KRH61786 | Soybean | cytosol, nucleus, plastid | 66.58 | 66.75 |
| GSMUA_Achr7P10070_001 | Banana | cytosol | 60.97 | 61.92 |
| KRH05133 | Soybean | mitochondrion | 64.54 | 60.53 |
| Zm00001d037640_P001 | Maize | plastid | 62.5 | 60.34 |
| Zm00001d009799_P001 | Maize | plastid | 62.5 | 60.34 |
| HORVU1Hr1G025480.1 | Barley | nucleus, peroxisome, vacuole | 62.24 | 59.08 |
| GSMUA_Achr6P05150_001 | Banana | cytosol, plastid, vacuole | 60.46 | 58.96 |
| TraesCS1A01G115500.1 | Wheat | golgi | 61.73 | 58.6 |
| TraesCS1B01G135400.1 | Wheat | cytosol | 61.22 | 58.25 |
| EES17800 | Sorghum | cytosol | 62.24 | 58.23 |
| TraesCS1D01G116900.1 | Wheat | cytosol | 61.48 | 58.07 |
| Os05t0171300-01 | Rice | mitochondrion, plastid | 61.22 | 57.83 |
| GSMUA_Achr7P10000_001 | Banana | mitochondrion | 33.93 | 57.08 |
| Os06t0602700-01 | Rice | plastid | 61.22 | 56.74 |
| TraesCS7B01G401600.1 | Wheat | cytosol | 60.2 | 55.66 |
| Zm00001d046400_P002 | Maize | mitochondrion | 59.44 | 55.48 |
| TraesCS7D01G483000.1 | Wheat | cytosol | 59.69 | 55.32 |
| HORVU7Hr1G111040.2 | Barley | cytosol | 59.44 | 55.21 |
| EER90006 | Sorghum | plastid | 59.18 | 55.11 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 57.91 | 50.78 |
| Os02t0202400-01 | Rice | plastid | 54.59 | 50.35 |
| TraesCS6D01G168200.1 | Wheat | golgi | 53.83 | 49.18 |
| TraesCS6B01G210000.1 | Wheat | plastid | 53.83 | 49.18 |
| TraesCS6A01G175100.1 | Wheat | plastid | 53.57 | 48.5 |
| EES04720 | Sorghum | plastid | 51.53 | 46.44 |
| Zm00001d015746_P001 | Maize | plastid | 51.28 | 46.0 |
| AT3G20240.1 | Thale cress | cytosol | 30.36 | 34.2 |
| AT4G01100.2 | Thale cress | cytosol | 28.83 | 30.87 |
| AT2G37890.1 | Thale cress | cytosol | 25.51 | 29.67 |
| AT3G55640.4 | Thale cress | plastid | 24.74 | 29.22 |
| AT4G26180.1 | Thale cress | cytosol | 24.23 | 28.7 |
| AT1G14560.1 | Thale cress | cytosol | 24.23 | 28.7 |
| AT3G53940.1 | Thale cress | cytosol | 26.02 | 27.95 |
| AT1G78180.1 | Thale cress | plastid | 28.32 | 26.55 |
| AT5G48970.1 | Thale cress | cytosol | 22.7 | 26.25 |
| AT5G64970.1 | Thale cress | cytosol, mitochondrion, plastid | 28.32 | 25.93 |
| AT3G21390.2 | Thale cress | cytosol | 23.21 | 25.49 |
| AT5G01500.1 | Thale cress | cytosol | 25.77 | 24.34 |
| AT3G51870.1 | Thale cress | plastid | 23.21 | 23.88 |
| AT5G61810.1 | Thale cress | cytosol | 27.3 | 22.38 |
| AT5G07320.1 | Thale cress | cytosol | 26.79 | 21.92 |
| AT5G51050.1 | Thale cress | cytosol | 26.53 | 20.88 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | EntrezGene:829375 | UniProt:A0A178UW29 | ProteinID:AEE86052.1 | EMBL:AF372944 |
| ArrayExpress:AT4G32400 | EnsemblPlantsGene:AT4G32400 | RefSeq:AT4G32400 | TAIR:AT4G32400 | RefSeq:AT4G32400-TAIR-G | EnsemblPlants:AT4G32400.1 |
| TAIR:AT4G32400.1 | EMBL:AY074831 | EMBL:AY084938 | ProteinID:CAA22567.1 | ProteinID:CAB79957.1 | Symbol:EMB104 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 |
| GO:GO:0006810 | GO:GO:0006839 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009528 | GO:GO:0009536 |
| GO:GO:0009706 | GO:GO:0009941 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR018108 |
| InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | RefSeq:NP_194966.1 | ProteinID:OAO98139.1 |
| PFAM:PF00153 | PO:PO:0000013 | PO:PO:0000025 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009066 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00926 | PFscan:PS50920 |
| PANTHER:PTHR24089 | PANTHER:PTHR24089:SF662 | UniProt:Q9SUV1 | SUPFAM:SSF103506 | UniParc:UPI000009C71C | SEG:seg |
Description
BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
Coordinates
chr4:+:15638353..15640517
Molecular Weight (calculated)
42573.5 Da
IEP (calculated)
9.841
GRAVY (calculated)
-0.056
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.