Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G401600.1 | Wheat | cytosol | 98.11 | 97.88 |
| TraesCS7A01G495700.1 | Wheat | cytosol, plastid | 48.7 | 97.63 |
| HORVU7Hr1G111040.2 | Barley | cytosol | 96.45 | 96.68 |
| Os06t0602700-01 | Rice | plastid | 88.42 | 88.42 |
| Zm00001d046400_P002 | Maize | mitochondrion | 83.92 | 84.52 |
| EER90006 | Sorghum | plastid | 83.22 | 83.61 |
| KRH15889 | Soybean | endoplasmic reticulum | 41.37 | 73.22 |
| GSMUA_Achr7P10070_001 | Banana | cytosol | 63.36 | 69.43 |
| CDX68843 | Canola | cytosol | 20.8 | 67.18 |
| TraesCS1D01G116900.1 | Wheat | cytosol | 65.72 | 66.99 |
| GSMUA_Achr7P10000_001 | Banana | mitochondrion | 36.41 | 66.09 |
| GSMUA_Achr6P05150_001 | Banana | cytosol, plastid, vacuole | 62.17 | 65.42 |
| VIT_04s0008g05240.t01 | Wine grape | cytosol | 60.52 | 64.48 |
| PGSC0003DMT400053564 | Potato | cytosol, nucleus, plastid | 60.05 | 63.82 |
| Solyc08g061090.2.1 | Tomato | plastid | 59.57 | 63.32 |
| CDX68841 | Canola | cytosol | 54.85 | 61.54 |
| KRH52458 | Soybean | extracellular | 56.74 | 61.38 |
| KRH61786 | Soybean | cytosol, nucleus, plastid | 56.5 | 61.13 |
| VIT_11s0016g05110.t01 | Wine grape | cytosol | 57.21 | 60.5 |
| Bra011344.1-P | Field mustard | cytosol | 54.37 | 60.21 |
| CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 54.37 | 60.21 |
| KRH03708 | Soybean | cytosol, mitochondrion, nucleus, plastid | 58.16 | 60.15 |
| Bra007793.1-P | Field mustard | cytosol | 56.26 | 59.8 |
| CDY11524 | Canola | cytosol | 56.26 | 59.8 |
| AT4G32400.1 | Thale cress | cytosol | 55.32 | 59.69 |
| CDX76755 | Canola | cytosol | 55.79 | 59.45 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 60.99 | 57.72 |
| TraesCS6D01G168200.1 | Wheat | golgi | 57.45 | 56.64 |
| KRH05133 | Soybean | mitochondrion | 55.32 | 55.98 |
| TraesCS5D01G282200.1 | Wheat | cytosol | 30.02 | 33.16 |
| TraesCS7D01G250600.1 | Wheat | cytosol | 27.9 | 32.42 |
| TraesCS1D01G434000.1 | Wheat | cytosol | 24.11 | 28.81 |
| TraesCS3D01G446800.1 | Wheat | cytoskeleton, cytosol, plastid | 22.46 | 28.27 |
| TraesCS5D01G306500.1 | Wheat | plastid | 20.09 | 28.24 |
| TraesCS6D01G176300.3 | Wheat | cytosol | 22.22 | 28.06 |
| TraesCS7D01G056700.1 | Wheat | cytosol | 22.22 | 27.41 |
| TraesCS3D01G058400.1 | Wheat | cytosol, mitochondrion, peroxisome | 21.28 | 27.36 |
| TraesCS4D01G304600.1 | Wheat | peroxisome | 26.24 | 26.43 |
| TraesCS4D01G211700.2 | Wheat | cytosol | 21.28 | 26.24 |
| TraesCS3D01G209300.1 | Wheat | plastid | 20.09 | 25.07 |
| TraesCS3D01G251700.1 | Wheat | cytosol, mitochondrion, plastid | 19.39 | 24.33 |
| TraesCS3D01G186300.1 | Wheat | mitochondrion | 21.28 | 22.96 |
| TraesCS7D01G372900.1 | Wheat | cytosol, plastid | 26.71 | 21.77 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G483000.1 | EnsemblPlantsGene:TraesCS7D01G483000 | Gene3D:1.50.40.10 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF358 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | SEG:seg | SUPFAM:SSF103506 |
| MapMan:24.2.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:593176404..593178720
Molecular Weight (calculated)
45778.9 Da
IEP (calculated)
9.379
GRAVY (calculated)
0.057
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTMMAVTA KSKNCTLASE KKHGWAIPQL PELRFPWDMQ EDNKAFSLSL LHDSASPHGG LFASVGLKVS TPAPAVSTSP AEQEFKIPFA DHCIKFVSSA
101: VGFPVVGAVD GSVEEEVVVD GKIIRKKAKK RGLKLKIKIG NPHLRRLVSG AIAGAVSRTC VAPLETIRTH LMVGSNGDSM TEVFQTIMKT EGWTGLFRGN
201: FVNVIRVAPS KAIELFAFDT AKKFLTPKAD ESSKTPFPPS LVAGALAGVS STLCTYPLEL IKTRLTIEKD VYDNFLHCLV KIVREEGPSE LYRGLTPSLI
301: GVVPYAATNY YAYDTLRKLY RKTFKQEEIS NIATLLIGSA AGAISSTATF PLEVARKQMQ AGAVGGRQVY KNVFHALYCI MEKEGIGGLY KGLGPSCIKL
401: MPAAGISFMC YEACKKILVE AEE
101: VGFPVVGAVD GSVEEEVVVD GKIIRKKAKK RGLKLKIKIG NPHLRRLVSG AIAGAVSRTC VAPLETIRTH LMVGSNGDSM TEVFQTIMKT EGWTGLFRGN
201: FVNVIRVAPS KAIELFAFDT AKKFLTPKAD ESSKTPFPPS LVAGALAGVS STLCTYPLEL IKTRLTIEKD VYDNFLHCLV KIVREEGPSE LYRGLTPSLI
301: GVVPYAATNY YAYDTLRKLY RKTFKQEEIS NIATLLIGSA AGAISSTATF PLEVARKQMQ AGAVGGRQVY KNVFHALYCI MEKEGIGGLY KGLGPSCIKL
401: MPAAGISFMC YEACKKILVE AEE
001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA
Arabidopsis Description
BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.