Factsheet for TraesCS6D01G168200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

golgi: 23128297
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G210000.1	Wheat	plastid	97.2	97.2
TraesCS6A01G175100.1	Wheat	plastid	96.97	96.07
Os02t0202400-01	Rice	plastid	73.66	74.35
EES04720	Sorghum	plastid	68.53	67.59
Zm00001d015746_P001	Maize	plastid	68.76	67.51
KRH15889	Soybean	endoplasmic reticulum	36.83	66.11
CDX68843	Canola	cytosol	19.35	63.36
GSMUA_Achr7P10070_001	Banana	cytosol	56.18	62.44
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	55.24	58.96
TraesCS7D01G483000.1	Wheat	cytosol	56.64	57.45
VIT_04s0008g05240.t01	Wine grape	cytosol	52.45	56.68
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	51.98	56.03
CDX68841	Canola	cytosol	49.18	55.97
TraesCS1D01G116900.1	Wheat	cytosol	54.08	55.9
Solyc08g061090.2.1	Tomato	plastid	51.75	55.78
CDX75241	Canola	cytoskeleton, cytosol, nucleus	49.65	55.76
KRH52458	Soybean	extracellular	50.58	55.5
Bra011344.1-P	Field mustard	cytosol	49.42	55.5
GSMUA_Achr7P10000_001	Banana	mitochondrion	30.07	55.36
Bra007793.1-P	Field mustard	cytosol	51.28	55.28
CDY11524	Canola	cytosol	51.28	55.28
CDX76755	Canola	cytosol	50.82	54.91
VIT_11s0016g05110.t01	Wine grape	cytosol	51.05	54.75
KRH61786	Soybean	cytosol, nucleus, plastid	49.65	54.48
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	51.75	54.28
AT4G32400.1	Thale cress	cytosol	49.18	53.83
KRH05133	Soybean	mitochondrion	50.58	51.91
GSMUA_Achr10P...	Banana	endoplasmic reticulum	52.21	50.11
TraesCS7D01G250600.1	Wheat	cytosol	29.14	34.34
TraesCS5D01G282200.1	Wheat	cytosol	29.6	33.16
TraesCS1D01G434000.1	Wheat	cytosol	24.71	29.94
TraesCS5D01G306500.1	Wheat	plastid	20.75	29.57
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	22.61	29.48
TraesCS6D01G176300.3	Wheat	cytosol	22.14	28.36
TraesCS7D01G056700.1	Wheat	cytosol	22.14	27.7
TraesCS4D01G211700.2	Wheat	cytosol	22.14	27.7
TraesCS3D01G209300.1	Wheat	plastid	21.45	27.14
TraesCS3D01G446800.1	Wheat	cytoskeleton, cytosol, plastid	20.98	26.79
TraesCS4D01G304600.1	Wheat	peroxisome	25.41	25.95
TraesCS3D01G251700.1	Wheat	cytosol, mitochondrion, plastid	20.28	25.82
TraesCS7D01G372900.1	Wheat	cytosol, plastid	26.57	21.97
TraesCS3D01G186300.1	Wheat	mitochondrion	20.05	21.94

Protein Annotations

EnsemblPlants:TraesCS6D01G168200.1	EnsemblPlantsGene:TraesCS6D01G168200	Gene3D:1.50.40.10	GO:GO:0006810	GO:GO:0008150	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF281	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926	SEG:seg	SUPFAM:SSF103506
MapMan:24.2.13	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:152268892..152271341

Molecular Weight (calculated)

45795.7 Da

IEP (calculated)

10.142

GRAVY (calculated)

-0.105

Length

429 amino acids

Sequence
(BLAST)

001: MAAAMAATTM VTKNNRASLA MDKKNWLLRP VPEIAFPWSS KPETRSLDFP RMALFASVGL SLSHGAQPVA REHDGKARPA DDVAHQLAAA GEAGVQKAQK
101: AKKAKKQQLG LRKVRVKIGN PHLRRLVSGA IAGAVSRTFV APLETIRTHL MVGSSGADSM AGVFRWIMGT EGWPGLFRGN AVNVLRVAPS KAIEHFTYDT
201: AKKYLTPEAG QPAKVPIPTP LVAGALAGVA STLCTYPMEL VKTRLTIEKD VYDNLLHAFV KIVRDEGPGE LYRGLAPSLI GVVPYAAANF YAYETLRGVY
301: RRASGKEEVG NVPTLLIGSA AGAIASTATF PLEVARKQMQ VGAVGGRQVY KNVLHAMYCI LKNEGTAGLY RGLGPSCIKL MPAAGISFMC YEACKKILVD
401: DKEDEPQEET ETGQAGGQAA PKSSNGARP

Best Arabidopsis Sequence Match ( AT3G20240.1 )
(BLAST)

001: MAMVVPKEGL VVMDKESVSS ASSDSHLRLQ PHFPDFTIPV KDFFKSREAR EFLSGALAGA MTKAVLAPLE TIRTRMIVGV GSRSIPGSFL EVVQKQGWQG
101: LWAGNEINMI RIIPTQAIEL GTFEWVKRAM TSAQVKLKKI EDAKIEIGDF SFSPSISWIS PVAVAGASAG IASTLVCHPL EVLKDRLTVS PEIYPSLSLA
201: IPRIFRADGI RGFYAGLGPT LVGMLPYSTC YYFMYDKMKT SYCKSKNKKA LSRPEMLVLG ALAGLTASTI SFPLEVARKR LMVGALKGEC PPNMAAAIAE
301: VVKKEGVMGL YRGWGASCLK VMPSSGITWV FYEAWKDILL AANTKPLI

Arabidopsis Description

Probable mitochondrial adenine nucleotide transporter BTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.