Factsheet for GSMUA_Achr7P10000_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G495700.1	Wheat	cytosol, plastid	52.36	57.82
KRH15889	Soybean	endoplasmic reticulum	54.94	53.56
GSMUA_Achr7P10070_001	Banana	cytosol	87.55	52.85
CDX68843	Canola	cytosol	27.47	48.85
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	79.83	46.27
Zm00001d037640_P001	Maize	plastid	72.53	41.63
Zm00001d009799_P001	Maize	plastid	72.1	41.38
Os05t0171300-01	Rice	mitochondrion, plastid	72.1	40.48
HORVU1Hr1G025480.1	Barley	nucleus, peroxisome, vacuole	70.82	39.95
TraesCS1A01G115500.1	Wheat	golgi	70.82	39.95
TraesCS1D01G116900.1	Wheat	cytosol	70.82	39.76
VIT_04s0008g05240.t01	Wine grape	cytosol	66.95	39.29
EES17800	Sorghum	cytosol	70.39	39.14
TraesCS1B01G135400.1	Wheat	cytosol	69.1	39.08
VIT_11s0016g05110.t01	Wine grape	cytosol	65.24	38.0
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	64.38	37.69
Zm00001d046400_P002	Maize	mitochondrion	67.38	37.38
EER90006	Sorghum	plastid	66.95	37.05
Solyc08g061090.2.1	Tomato	plastid	63.09	36.93
Os06t0602700-01	Rice	plastid	66.95	36.88
HORVU7Hr1G111040.2	Barley	cytosol	66.52	36.73
TraesCS7B01G401600.1	Wheat	cytosol	66.52	36.56
TraesCS7D01G483000.1	Wheat	cytosol	66.09	36.41
KRH03708	Soybean	cytosol, mitochondrion, nucleus, plastid	63.52	36.19
KRH52458	Soybean	extracellular	59.23	35.29
Bra007793.1-P	Field mustard	cytosol	60.09	35.18
CDY11524	Canola	cytosol	60.09	35.18
CDX76755	Canola	cytosol	59.23	34.76
KRH61786	Soybean	cytosol, nucleus, plastid	57.94	34.53
GSMUA_Achr10P...	Banana	endoplasmic reticulum	66.09	34.45
KRH05133	Soybean	mitochondrion	61.37	34.21
AT4G32400.1	Thale cress	cytosol	57.08	33.93
CDX68841	Canola	cytosol	54.51	33.69
CDX75241	Canola	cytoskeleton, cytosol, nucleus	54.51	33.25
Bra011344.1-P	Field mustard	cytosol	54.08	32.98
Zm00001d015746_P001	Maize	plastid	58.8	31.35
Os02t0202400-01	Rice	plastid	56.22	30.82
TraesCS6B01G210000.1	Wheat	plastid	56.22	30.54
TraesCS6A01G175100.1	Wheat	plastid	56.22	30.25
TraesCS6D01G168200.1	Wheat	golgi	55.36	30.07
EES04720	Sorghum	plastid	55.79	29.89
GSMUA_Achr11P...	Banana	extracellular	9.44	21.78
GSMUA_Achr6P30940_001	Banana	cytosol	30.9	20.06
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	24.89	19.53
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	24.46	19.13
GSMUA_Achr2P14780_001	Banana	mitochondrion	27.47	18.5
GSMUA_Achr11P...	Banana	cytosol	9.87	18.25
GSMUA_Achr6P03740_001	Banana	cytosol	27.9	17.96
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	21.46	17.61
GSMUA_Achr10P...	Banana	cytosol	24.89	16.71
GSMUA_Achr8P02430_001	Banana	cytosol	24.03	15.95
GSMUA_Achr2P06340_001	Banana	cytosol	24.46	15.92
GSMUA_Achr7P09310_001	Banana	cytosol	23.61	15.9
GSMUA_Achr10P...	Banana	cytosol	22.75	15.73
GSMUA_Achr3P32000_001	Banana	cytosol	24.03	15.69
GSMUA_Achr8P26260_001	Banana	cytosol, peroxisome, plastid	22.75	15.68
GSMUA_Achr7P24620_001	Banana	cytosol	23.61	15.41
GSMUA_Achr9P03630_001	Banana	mitochondrion	23.61	14.59
GSMUA_Achr8P22520_001	Banana	cytosol	20.6	14.5
GSMUA_Achr6P33950_001	Banana	plastid	24.46	14.25
GSMUA_Achr10P...	Banana	cytosol	22.32	13.37
GSMUA_AchrUn_...	Banana	cytosol	25.75	11.67
GSMUA_Achr8P26070_001	Banana	cytosol	25.32	11.46
GSMUA_Achr5P05990_001	Banana	cytosol	24.89	11.28
GSMUA_Achr10P...	Banana	mitochondrion	4.72	8.21
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	5.15	7.84
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	2.58	3.92

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr7G10000_001	EnsemblPlants:GSMUA_Achr7P10000_001	EnsemblPlants:GSMUA_Achr7T10000_001	InterPro:IPR018108
InterPro:IPR023395	UniProt:M0TG88	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF358	SUPFAM:SSF103506	UniParc:UPI0002960A02
SEG:seg	:	:	:	:	:

Description

Putative Protein brittle-1, chloroplastic/amyloplastic [Source:GMGC_GENE;Acc:GSMUA_Achr7G10000_001]

Coordinates

chr7:-:8112235..8114700

Molecular Weight (calculated)

25130.3 Da

IEP (calculated)

9.000

GRAVY (calculated)

0.042

Length

233 amino acids

Sequence
(BLAST)

001: MLWCPNLTKS RFCFFSWNLH EGFYPTGGLF ASVGQMGVGF GVSPNTSNPT NNSVNVSGTN LYMKYVSPEV IRVAPSKAIE LFPYDTAKKA LTPKDGEQPK
101: LPLPPSLVAG AVAGVSSTLC TYPLELLTTR LTIQRDVYDN LLHALLKIIQ EEGPSELYRG LTPSLIGVVP YAATNYFAYD TLKKLYKKTF NTDDIGNVAT
201: LLIGSAAGAI SSSATFPLEV ARKHMQVGAV GGR

Best Arabidopsis Sequence Match ( AT4G32400.1 )
(BLAST)

001: MGKTGIQLFD DSRNGFFSVS DLGFDSSLNS SNYHPIGGLF ASVNQTNPFA SLSSSDLSNR GNNSFSTQLN DLYTKYMPGK EEEEEVVNGE KRKRKKKGGL
101: TLKIKIANPS LRRLLSGAVA GAVSRTVVAP LETIRTHLMV GSGGNSSTEV FSDIMKHEGW TGLFRGNLVN VIRVAPARAV ELFVFETVNK KLSPPHGQES
201: KIPIPASLLA GACAGVSQTL LTYPLELVKT RLTIQRGVYK GIFDAFLKII REEGPTELYR GLAPSLIGVV PYAATNYFAY DSLRKAYRSF SKQEKIGNIE
301: TLLIGSLAGA LSSTATFPLE VARKHMQVGA VSGRVVYKNM LHALVTILEH EGILGWYKGL GPSCLKLVPA AGISFMCYEA CKKILIENNQ EA

Arabidopsis Description

BT1SHS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.