Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | mitochondrion | 32.33 | 79.85 |
| Os01t0934200-01 | Rice | cytosol | 77.04 | 75.89 |
| KXG34072 | Sorghum | cytosol | 76.44 | 73.76 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus | 33.84 | 73.2 |
| TraesCS3D01G446800.1 | Wheat | cytoskeleton, cytosol, plastid | 73.41 | 72.32 |
| TraesCS3A01G454400.1 | Wheat | cytoskeleton, cytosol, plastid | 73.11 | 72.02 |
| Zm00001d042213_P004 | Maize | cytosol, plastid | 77.64 | 66.58 |
| HORVU3Hr1G098170.1 | Barley | mitochondrion | 73.11 | 63.68 |
| Zm00001d011918_P002 | Maize | cytosol | 75.23 | 62.25 |
| TraesCS3B01G493000.1 | Wheat | cytosol | 73.72 | 60.25 |
| GSMUA_Achr11P... | Banana | extracellular | 8.46 | 27.72 |
| GSMUA_Achr3P32000_001 | Banana | cytosol | 29.31 | 27.17 |
| GSMUA_Achr8P26260_001 | Banana | cytosol, peroxisome, plastid | 27.19 | 26.63 |
| GSMUA_Achr7P24620_001 | Banana | cytosol | 28.4 | 26.33 |
| GSMUA_Achr2P06340_001 | Banana | cytosol | 28.4 | 26.26 |
| GSMUA_Achr10P... | Banana | cytosol | 27.49 | 26.22 |
| GSMUA_Achr4P24190_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 23.26 | 25.84 |
| GSMUA_Achr6P03370_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 22.96 | 25.59 |
| GSMUA_Achr7P09310_001 | Banana | cytosol | 26.59 | 25.43 |
| GSMUA_Achr8P02430_001 | Banana | cytosol | 26.59 | 25.07 |
| GSMUA_Achr8P25070_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 21.45 | 25.0 |
| GSMUA_Achr10P... | Banana | cytosol | 25.38 | 24.93 |
| GSMUA_Achr7P10070_001 | Banana | cytosol | 28.1 | 24.09 |
| GSMUA_Achr8P25060_001 | Banana | cytosol, mitochondrion, plastid | 10.88 | 23.53 |
| GSMUA_Achr6P03740_001 | Banana | cytosol | 25.38 | 23.2 |
| GSMUA_Achr6P05150_001 | Banana | cytosol, plastid, vacuole | 27.49 | 22.64 |
| GSMUA_Achr6P30940_001 | Banana | cytosol | 24.47 | 22.56 |
| GSMUA_Achr2P14780_001 | Banana | mitochondrion | 23.26 | 22.25 |
| GSMUA_Achr6P33950_001 | Banana | plastid | 26.28 | 21.75 |
| GSMUA_Achr9P03630_001 | Banana | mitochondrion | 23.57 | 20.69 |
| GSMUA_Achr7P10000_001 | Banana | mitochondrion | 14.5 | 20.6 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 27.79 | 20.58 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.4 | 18.29 |
| GSMUA_Achr10P... | Banana | cytosol | 21.15 | 17.99 |
| GSMUA_Achr8P26070_001 | Banana | cytosol | 27.79 | 17.86 |
| GSMUA_Achr11P... | Banana | cytosol | 6.65 | 17.46 |
| GSMUA_Achr5P05990_001 | Banana | cytosol | 26.59 | 17.12 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:GSMUA_Achr8G22520_001 | EnsemblPlants:GSMUA_Achr8P22520_001 | EnsemblPlants:GSMUA_Achr8T22520_001 | InterPro:IPR018108 |
| InterPro:IPR023395 | UniProt:M0TSQ5 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PFAM:PF00153 |
| PRINTS:PR00926 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF628 | SUPFAM:SSF103506 | UniParc:UPI0002966346 |
| SEG:seg | : | : | : | : | : |
Description
Putative Mitochondrial thiamine pyrophosphate carrier [Source:GMGC_GENE;Acc:GSMUA_Achr8G22520_001]
Coordinates
chr8:+:27072298..27086283
Molecular Weight (calculated)
36948.9 Da
IEP (calculated)
10.155
GRAVY (calculated)
-0.024
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEPGSLRRA LIDSLAGAIS GGISRTVTSP LDVIKIRFQV QLEPTSSWAL LHRDSYGSSK YTGILQSSKV ILREEGLTGF WRGNVPALLL YMPYTAIQFT
101: VLHKLKTIAA GSSKAEDHLK LSPYLPYLSG ALAGFAATIG SYPFDLLRTI LASQGEPKVY STMRSAFLDI IRTRGIRGLY AGLSPTLVEI IPYAGLQIGS
201: FDTFKRWMMA WNRYRFSNIS PVRRDDSPSS FQLFLCGLAA GACAKVICHP LDVVKKRFQI EGLQRHPKYG ARVENHRYKN MYHALQQILR SEGWHGLYKG
301: IFPSLIKSAP ASAVTFVSYE YTSRWLESLL P
101: VLHKLKTIAA GSSKAEDHLK LSPYLPYLSG ALAGFAATIG SYPFDLLRTI LASQGEPKVY STMRSAFLDI IRTRGIRGLY AGLSPTLVEI IPYAGLQIGS
201: FDTFKRWMMA WNRYRFSNIS PVRRDDSPSS FQLFLCGLAA GACAKVICHP LDVVKKRFQI EGLQRHPKYG ARVENHRYKN MYHALQQILR SEGWHGLYKG
301: IFPSLIKSAP ASAVTFVSYE YTSRWLESLL P
001: MIPTTATVDD EPGQIKRALI DASAGAISGG VSRSVTSPLD VIKIRFQVQL EPTTSWGLVR GNLSGASKYT GMVQATKDIF REEGFRGFWR GNVPALLMVM
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW
Arabidopsis Description
Mitochondrial thiamine diphosphate carrier 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI73]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.