Factsheet for GSMUA_Achr10P27950_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P09310_001	Banana	cytosol	76.95	77.17
Zm00001d016299_P001	Maize	cytosol, mitochondrion, plastid	70.89	73.43
KXG29836	Sorghum	cytosol, mitochondrion, plastid	70.89	73.21
TraesCS6D01G176300.3	Wheat	cytosol	70.61	73.13
TraesCS6B01G231800.3	Wheat	cytosol	70.61	73.13
TraesCS6A01G187900.2	Wheat	cytosol	70.32	72.84
VIT_11s0016g02470.t01	Wine grape	cytosol	70.89	72.14
HORVU6Hr1G042080.7	Barley	cytosol	69.45	71.73
TraesCS7A01G061900.2	Wheat	cytosol	67.72	70.15
TraesCS7D01G056700.1	Wheat	cytosol	69.16	69.97
KRH49045	Soybean	cytosol	64.27	69.04
Solyc12g008770.1.1	Tomato	extracellular	66.28	68.05
AT4G26180.1	Thale cress	cytosol	64.55	67.67
PGSC0003DMT400000910	Potato	cytosol	66.28	67.25
CDY68466	Canola	cytosol	63.98	66.67
Bra026457.1-P	Field mustard	cytosol	63.98	66.47
CDX94361	Canola	cytosol	63.98	66.47
TraesCS4A01G428000.1	Wheat	mitochondrion	68.3	61.56
Os02t0226300-00	Rice	cytosol, mitochondrion, plastid	62.25	60.5
TraesCS4A01G427000.1	Wheat	mitochondrion	61.38	56.95
GSMUA_Achr8P26260_001	Banana	cytosol, peroxisome, plastid	53.03	54.44
GSMUA_Achr3P32000_001	Banana	cytosol	34.58	33.61
GSMUA_Achr7P24620_001	Banana	cytosol	34.58	33.61
GSMUA_Achr8P25060_001	Banana	cytosol, mitochondrion, plastid	14.7	33.33
GSMUA_Achr2P06340_001	Banana	cytosol	33.43	32.4
GSMUA_Achr8P02430_001	Banana	cytosol	32.56	32.19
GSMUA_Achr11P...	Banana	extracellular	9.22	31.68
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	26.22	30.64
GSMUA_Achr8P25070_001	Banana	endoplasmic reticulum, plasma membrane, plastid	25.07	30.63
GSMUA_Achr10P...	Banana	cytosol	28.53	29.38
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	24.78	28.86
GSMUA_Achr8P22520_001	Banana	cytosol	26.22	27.49
GSMUA_Achr6P33950_001	Banana	plastid	31.41	27.25
GSMUA_Achr9P03630_001	Banana	mitochondrion	27.95	25.73
GSMUA_Achr2P14780_001	Banana	mitochondrion	25.07	25.14
GSMUA_Achr7P10000_001	Banana	mitochondrion	16.71	24.89
GSMUA_Achr7P10070_001	Banana	cytosol	27.38	24.61
GSMUA_Achr6P05150_001	Banana	cytosol, plastid, vacuole	28.24	24.38
GSMUA_Achr6P03740_001	Banana	cytosol	23.34	22.38
GSMUA_Achr10P...	Banana	mitochondrion	8.36	21.64
GSMUA_Achr10P...	Banana	cytosol	24.21	21.59
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus	9.51	21.57
GSMUA_Achr10P...	Banana	endoplasmic reticulum	27.09	21.03
GSMUA_Achr11P...	Banana	cytosol	7.49	20.63
GSMUA_Achr6P30940_001	Banana	cytosol	21.33	20.61
GSMUA_AchrUn_...	Banana	cytosol	27.09	18.29
GSMUA_Achr5P05990_001	Banana	cytosol	27.09	18.29
GSMUA_Achr8P26070_001	Banana	cytosol	26.8	18.06

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr10G27950_001	EnsemblPlants:GSMUA_Achr10P27950_001	EnsemblPlants:GSMUA_Achr10T27950_001	InterPro:IPR018108
InterPro:IPR023395	UniProt:M0RM19	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF245	SUPFAM:SSF103506	UniParc:UPI000296F740
SEG:seg	:	:	:	:	:

Description

Putative Graves disease carrier protein homolog [Source:GMGC_GENE;Acc:GSMUA_Achr10G27950_001]

Coordinates

chr10:-:30895364..30899240

Molecular Weight (calculated)

38253.6 Da

IEP (calculated)

10.226

GRAVY (calculated)

-0.037

Length

347 amino acids

Sequence
(BLAST)

001: MAEERRREVA ATKAVEQDVR GGRVPLIVKE FVAGGVAGGV AKTAVAPLER VKILFQTRRA EFHTVGLLGS FQKILQTEGL LGFYRGNGAS VARIVPYAAL
101: HYMAYEQYRR WIILGFPDVG KGPVLDLVAG SIAGGTAVIF TYPLDLVRTK LAYQVVGPSR LKNKGPYHSS EQVYRGILDC ILKIHRQNGL RGLYRGVGPS
201: LYGIFPYSGL KFYFYEELKR HIPEEHKQDV IMKLACGSLA ALLGQTITYP LDVVRRQMQV QALSTSNNKS GKGTFESLVM ISQTQGWRQL FSGLSINYLK
301: VVPSVAIGFT VYDIMKSWLK VPSRDEAAAA SAVTENKSNH PSSLHTS

Best Arabidopsis Sequence Match ( AT4G26180.1 )
(BLAST)

001: MAEGEEKNGI IDSIPLFAKE LIAGGVTGGI AKTAVAPLER IKILFQTRRD EFKRIGLVGS INKIGKTEGL MGFYRGNGAS VARIVPYAAL HYMAYEEYRR
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK TQVKAIPVEQ IIYRGIVDCF SRTYRESGAR GLYRGVAPSL YGIFPYAGLK
201: FYFYEEMKRH VPPEHKQDIS LKLVCGSVAG LLGQTLTYPL DVVRRQMQVE RLYSAVKEET RRGTMQTLFK IAREEGWKQL FSGLSINYLK VVPSVAIGFT
301: VYDIMKLHLR VPPREEPEAE AVTTRKRKVF T

Arabidopsis Description

COAC2Mitochondrial carrier protein CoAc2 [Source:UniProtKB/Swiss-Prot;Acc:F4JU70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.