Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G056700.1 | Wheat | cytosol | 96.42 | 94.17 |
| TraesCS6A01G187900.2 | Wheat | cytosol | 91.64 | 91.64 |
| HORVU6Hr1G042080.7 | Barley | cytosol | 90.15 | 89.88 |
| KXG29836 | Sorghum | cytosol, mitochondrion, plastid | 81.19 | 80.95 |
| Zm00001d016299_P001 | Maize | cytosol, mitochondrion, plastid | 80.3 | 80.3 |
| TraesCS4A01G428000.1 | Wheat | mitochondrion | 91.04 | 79.22 |
| TraesCS4A01G427000.1 | Wheat | mitochondrion | 79.7 | 71.39 |
| GSMUA_Achr10P... | Banana | cytosol | 70.15 | 67.72 |
| Os02t0226300-00 | Rice | cytosol, mitochondrion, plastid | 71.64 | 67.23 |
| Solyc12g008770.1.1 | Tomato | extracellular | 65.37 | 64.79 |
| VIT_11s0016g02470.t01 | Wine grape | cytosol | 65.67 | 64.52 |
| PGSC0003DMT400000910 | Potato | cytosol | 65.67 | 64.33 |
| GSMUA_Achr7P09310_001 | Banana | cytosol | 65.97 | 63.87 |
| AT4G26180.1 | Thale cress | cytosol | 62.69 | 63.44 |
| KRH49045 | Soybean | cytosol | 60.9 | 63.16 |
| Bra026457.1-P | Field mustard | cytosol | 62.09 | 62.28 |
| CDX94361 | Canola | cytosol | 62.09 | 62.28 |
| CDY68466 | Canola | cytosol | 61.79 | 62.16 |
| TraesCS3A01G206300.1 | Wheat | plastid | 52.54 | 51.92 |
| TraesCS3A01G251300.1 | Wheat | cytosol, mitochondrion, plastid | 49.55 | 49.26 |
| TraesCS5A01G277400.1 | Wheat | mitochondrion | 34.33 | 43.56 |
| TraesCS5A01G301600.1 | Wheat | plastid | 36.42 | 37.2 |
| TraesCS1A01G425000.1 | Wheat | cytosol | 34.33 | 32.49 |
| TraesCS7A01G495700.1 | Wheat | cytosol, plastid | 19.7 | 31.28 |
| TraesCS4A01G093400.1 | Wheat | cytosol | 28.96 | 28.36 |
| TraesCS3A01G058200.1 | Wheat | cytosol, mitochondrion, peroxisome | 27.76 | 28.27 |
| TraesCS3A01G454400.1 | Wheat | cytoskeleton, cytosol, plastid | 26.57 | 26.49 |
| TraesCS3A01G181500.1 | Wheat | golgi | 28.96 | 24.74 |
| TraesCS1A01G115500.1 | Wheat | golgi | 27.16 | 22.03 |
| TraesCS6A01G175100.1 | Wheat | plastid | 27.46 | 21.25 |
| TraesCS7A01G252500.1 | Wheat | cytosol | 23.28 | 21.2 |
| TraesCS4A01G407200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 25.37 | 20.09 |
| TraesCS7A01G376600.1 | Wheat | cytosol, plastid | 29.25 | 18.85 |
| TraesCS5A01G274600.1 | Wheat | cytosol, plastid | 21.49 | 18.8 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G061900.2 | EnsemblPlantsGene:TraesCS7A01G061900 | Gene3D:1.50.40.10 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF245 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | SEG:seg | SUPFAM:SSF103506 |
| MapMan:24.2.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:30674045..30683302
Molecular Weight (calculated)
36668.6 Da
IEP (calculated)
9.574
GRAVY (calculated)
0.045
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAERGGWA VPLAVPELIA GGVAGGVAKC AVAPLERVKI LLQTSRAEFR GSGLVGSFRT IYRTEGPFGF YRGNGASVAR IVPYAALHYM AYEEYHRWII
101: LGFPNVQQGP VLDLVAGSIA GGTAVVSTYP LDLVRTKLAY QLQVKGAVNL SLRESKPSEQ VYKGILDCLK IIYRQNGLKG LYRGMAPSLY GIFPYSGLKF
201: YFYEKMKTHV PEEHRRDIIP KLACGSVAGL LGQTITYPLD VVRRQMQVQA LSSSNLVKGK ETFGSLAMIE KHQGWKQLFS GLSINYLKVV PSAALGLTVY
301: DSMRDWLNVP SREQVPVVVP VLSEDGSDAA PVYSS
101: LGFPNVQQGP VLDLVAGSIA GGTAVVSTYP LDLVRTKLAY QLQVKGAVNL SLRESKPSEQ VYKGILDCLK IIYRQNGLKG LYRGMAPSLY GIFPYSGLKF
201: YFYEKMKTHV PEEHRRDIIP KLACGSVAGL LGQTITYPLD VVRRQMQVQA LSSSNLVKGK ETFGSLAMIE KHQGWKQLFS GLSINYLKVV PSAALGLTVY
301: DSMRDWLNVP SREQVPVVVP VLSEDGSDAA PVYSS
001: MGSSQGSTLS ADVMSLVDTL PVLAKTLIAG GAAGAIAKTA VAPLERIKIL LQTRTNDFKT LGVSQSLKKV LQFDGPLGFY KGNGASVIRI IPYAALHYMT
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
101: YEVYRDWILE KNLPLGSGPI VDLVAGSAAG GTAVLCTYPL DLARTKLAYQ VSDTRQSLRG GANGFYRQPT YSGIKEVLAM AYKEGGPRGL YRGIGPTLIG
201: ILPYAGLKFY IYEELKRHVP EEHQNSVRMH LPCGALAGLF GQTITYPLDV VRRQMQVENL QPMTSEGNNK RYKNTFDGLN TIVRTQGWKQ LFAGLSINYI
301: KIVPSVAIGF TVYESMKSWM RIPPRERSKP A
Arabidopsis Description
COAC1Mitochondrial carrier protein CoAc1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.