Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68466 | Canola | cytosol | 96.71 | 97.0 |
| AT4G26180.1 | Thale cress | cytosol | 91.62 | 92.45 |
| VIT_11s0016g02470.t01 | Wine grape | cytosol | 72.46 | 70.97 |
| Solyc12g008770.1.1 | Tomato | extracellular | 71.56 | 70.71 |
| PGSC0003DMT400000910 | Potato | cytosol | 71.26 | 69.59 |
| KRH49045 | Soybean | cytosol | 66.77 | 69.04 |
| KXG29836 | Sorghum | cytosol, mitochondrion, plastid | 66.17 | 65.77 |
| Zm00001d016299_P001 | Maize | cytosol, mitochondrion, plastid | 65.87 | 65.67 |
| TraesCS6D01G176300.3 | Wheat | cytosol | 64.67 | 64.48 |
| TraesCS6B01G231800.3 | Wheat | cytosol | 64.37 | 64.18 |
| GSMUA_Achr10P... | Banana | cytosol | 66.47 | 63.98 |
| TraesCS6A01G187900.2 | Wheat | cytosol | 64.07 | 63.88 |
| HORVU6Hr1G042080.7 | Barley | cytosol | 64.07 | 63.69 |
| TraesCS7A01G061900.2 | Wheat | cytosol | 62.28 | 62.09 |
| TraesCS7D01G056700.1 | Wheat | cytosol | 63.17 | 61.52 |
| GSMUA_Achr7P09310_001 | Banana | cytosol | 60.78 | 58.67 |
| CDX84024 | Canola | cytosol | 54.79 | 55.62 |
| CDX96850 | Canola | cytosol | 54.79 | 55.29 |
| CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 53.89 | 55.05 |
| TraesCS4A01G428000.1 | Wheat | mitochondrion | 61.98 | 53.77 |
| Os02t0226300-00 | Rice | cytosol, mitochondrion, plastid | 56.89 | 53.22 |
| TraesCS4A01G427000.1 | Wheat | mitochondrion | 56.89 | 50.8 |
| CDY67915 | Canola | cytosol | 37.13 | 49.21 |
| CDY01954 | Canola | mitochondrion | 21.56 | 36.55 |
| CDX71722 | Canola | cytosol | 36.53 | 36.09 |
| CDY11371 | Canola | cytosol | 36.53 | 35.99 |
| CDY48505 | Canola | cytosol | 36.23 | 34.57 |
| CDY07175 | Canola | cytosol | 36.23 | 34.57 |
| CDY66909 | Canola | cytosol, mitochondrion, plastid | 12.57 | 34.43 |
| CDX91877 | Canola | cytosol | 36.23 | 34.28 |
| CDX74363 | Canola | cytosol | 36.23 | 34.28 |
| CDY07764 | Canola | plastid | 33.83 | 33.24 |
| CDY59491 | Canola | cytosol | 33.53 | 32.94 |
| CDX68843 | Canola | cytosol | 12.57 | 32.06 |
| CDY18420 | Canola | plastid | 32.63 | 31.59 |
| CDX93344 | Canola | plastid | 32.63 | 31.59 |
| CDX70930 | Canola | cytosol | 18.26 | 31.44 |
| CDY13155 | Canola | cytosol | 32.04 | 30.57 |
| CDY40244 | Canola | plastid | 30.54 | 30.45 |
| CDX76183 | Canola | cytosol | 31.44 | 30.0 |
| CDY41199 | Canola | plastid | 30.54 | 28.33 |
| CDX86261 | Canola | cytosol | 27.25 | 27.0 |
| CDX85385 | Canola | cytosol | 27.25 | 27.0 |
| CDY56673 | Canola | cytosol | 26.95 | 26.55 |
| CDX68841 | Canola | cytosol | 29.94 | 26.53 |
| CDY19928 | Canola | cytosol | 26.35 | 26.27 |
| CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 29.94 | 26.18 |
| CDX97455 | Canola | plastid | 11.68 | 25.83 |
| CDX95305 | Canola | plastid | 29.34 | 25.72 |
| CDY23168 | Canola | plastid | 29.34 | 25.72 |
| CDX76755 | Canola | cytosol | 30.24 | 25.44 |
| CDY11524 | Canola | cytosol | 30.24 | 25.38 |
| CDX80771 | Canola | cytosol, plastid | 29.94 | 24.75 |
| CDY11199 | Canola | plastid | 29.94 | 24.69 |
| CDX68026 | Canola | plastid | 27.54 | 23.17 |
| CDX79251 | Canola | plastid | 27.54 | 23.12 |
| CDY36050 | Canola | cytosol, plastid | 23.65 | 22.7 |
| CDX82257 | Canola | cytosol | 23.35 | 22.41 |
| CDY14527 | Canola | plastid | 27.54 | 22.06 |
| CDY00231 | Canola | cytosol | 31.44 | 22.01 |
| CDX86953 | Canola | cytosol | 31.44 | 22.01 |
| CDY08834 | Canola | plastid | 27.54 | 22.01 |
| CDY29805 | Canola | cytosol | 22.75 | 21.84 |
| CDY25400 | Canola | cytosol, plastid | 22.75 | 21.84 |
| CDY55175 | Canola | cytosol | 30.24 | 21.58 |
| CDY14050 | Canola | cytosol | 30.24 | 21.58 |
| CDY31292 | Canola | cytosol | 22.46 | 21.43 |
| CDX70028 | Canola | cytosol | 25.15 | 21.16 |
| CDX71683 | Canola | cytosol | 30.84 | 20.6 |
| CDY05832 | Canola | cytosol | 30.54 | 20.4 |
| CDX98981 | Canola | endoplasmic reticulum, golgi | 23.05 | 18.08 |
| CDY33993 | Canola | plastid | 18.86 | 17.65 |
| CDY39471 | Canola | cytosol | 17.66 | 14.71 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:A0A078DYR4 | EnsemblPlants:CDX94361 | ProteinID:CDX94361 | ProteinID:CDX94361.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00157479001 | InterPro:Graves_DC |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PFAM:PF00153 |
| PRINTS:PR00926 | PRINTS:PR00928 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF245 | SUPFAM:SSF103506 |
| UniParc:UPI0004EADA48 | SEG:seg | : | : | : | : |
Description
BnaC01g18230D
Coordinates
chrLK031881:+:518679..521183
Molecular Weight (calculated)
37332.6 Da
IEP (calculated)
10.011
GRAVY (calculated)
-0.084
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGEEKNGI LDSMPVFAKE LIAGGVTGGI AKTAVAPLER IKILFQTRRD EFKRIGLVGS INKIGKTEGL MGFYRGNGAS VARIVPYAAL HYMAYEEYRR
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK AQAKAVTIPM EQFLYTGITD CFSRTYRESG FRGLYRGVAP SLYGIFPYAG
201: LKFYFYEEMK RHVPAEHKKD ISLKLVCGSV AGLLGQTLTY PLDVVRRQMQ VERLYAAAKE ETVRRGTMQT LVKIAREEGW KQLFSGLSIN YLKVVPSVAI
301: GFTVYDVMKL HLRVPSREET EAEDRTTRKR NTLS
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK AQAKAVTIPM EQFLYTGITD CFSRTYRESG FRGLYRGVAP SLYGIFPYAG
201: LKFYFYEEMK RHVPAEHKKD ISLKLVCGSV AGLLGQTLTY PLDVVRRQMQ VERLYAAAKE ETVRRGTMQT LVKIAREEGW KQLFSGLSIN YLKVVPSVAI
301: GFTVYDVMKL HLRVPSREET EAEDRTTRKR NTLS
001: MAEGEEKNGI IDSIPLFAKE LIAGGVTGGI AKTAVAPLER IKILFQTRRD EFKRIGLVGS INKIGKTEGL MGFYRGNGAS VARIVPYAAL HYMAYEEYRR
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK TQVKAIPVEQ IIYRGIVDCF SRTYRESGAR GLYRGVAPSL YGIFPYAGLK
201: FYFYEEMKRH VPPEHKQDIS LKLVCGSVAG LLGQTLTYPL DVVRRQMQVE RLYSAVKEET RRGTMQTLFK IAREEGWKQL FSGLSINYLK VVPSVAIGFT
301: VYDIMKLHLR VPPREEPEAE AVTTRKRKVF T
101: WIIFGFPDTT RGPLLDLVAG SFAGGTAVLF TYPLDLVRTK LAYQVVGSAK TQVKAIPVEQ IIYRGIVDCF SRTYRESGAR GLYRGVAPSL YGIFPYAGLK
201: FYFYEEMKRH VPPEHKQDIS LKLVCGSVAG LLGQTLTYPL DVVRRQMQVE RLYSAVKEET RRGTMQTLFK IAREEGWKQL FSGLSINYLK VVPSVAIGFT
301: VYDIMKLHLR VPPREEPEAE AVTTRKRKVF T
Arabidopsis Description
COAC2Mitochondrial carrier protein CoAc2 [Source:UniProtKB/Swiss-Prot;Acc:F4JU70]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.