Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036153.1-P | Field mustard | cytosol | 99.4 | 99.4 |
| CDY56673 | Canola | cytosol | 98.21 | 97.05 |
| CDX86261 | Canola | cytosol | 95.22 | 94.66 |
| CDX85385 | Canola | cytosol | 94.93 | 94.36 |
| AT5G48970.1 | Thale cress | cytosol | 93.73 | 92.63 |
| PGSC0003DMT400087691 | Potato | mitochondrion | 39.4 | 79.04 |
| KRH37122 | Soybean | cytosol | 77.01 | 78.66 |
| KRH12112 | Soybean | cytosol | 76.72 | 78.35 |
| KRH02242 | Soybean | cytosol | 76.42 | 78.29 |
| KRH50868 | Soybean | cytosol | 77.01 | 77.95 |
| VIT_05s0020g01380.t01 | Wine grape | cytosol | 76.12 | 77.27 |
| Solyc01g067070.2.1 | Tomato | cytosol | 75.82 | 76.74 |
| Solyc12g099630.1.1 | Tomato | cytosol | 51.94 | 74.04 |
| Os01t0934200-01 | Rice | cytosol | 71.94 | 71.73 |
| KXG34072 | Sorghum | cytosol | 71.94 | 70.26 |
| TraesCS3D01G446800.1 | Wheat | cytoskeleton, cytosol, plastid | 69.55 | 69.35 |
| TraesCS3A01G454400.1 | Wheat | cytoskeleton, cytosol, plastid | 69.55 | 69.35 |
| Zm00001d042213_P004 | Maize | cytosol, plastid | 73.13 | 63.47 |
| GSMUA_Achr10P... | Banana | mitochondrion | 24.78 | 61.94 |
| HORVU3Hr1G098170.1 | Barley | mitochondrion | 69.25 | 61.05 |
| Zm00001d011918_P002 | Maize | cytosol | 69.55 | 58.25 |
| TraesCS3B01G493000.1 | Wheat | cytosol | 69.55 | 57.53 |
| CDX71722 | Canola | cytosol | 31.04 | 30.77 |
| CDX68843 | Canola | cytosol | 11.94 | 30.53 |
| CDY01954 | Canola | mitochondrion | 17.91 | 30.46 |
| CDY11371 | Canola | cytosol | 30.75 | 30.38 |
| CDY48505 | Canola | cytosol | 29.85 | 28.57 |
| CDY07175 | Canola | cytosol | 29.85 | 28.57 |
| CDX91877 | Canola | cytosol | 29.85 | 28.33 |
| CDX74363 | Canola | cytosol | 29.85 | 28.33 |
| CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 27.46 | 28.13 |
| CDX84024 | Canola | cytosol | 27.46 | 27.96 |
| CDX96850 | Canola | cytosol | 27.46 | 27.79 |
| CDX70930 | Canola | cytosol | 15.82 | 27.32 |
| CDY40244 | Canola | plastid | 27.16 | 27.16 |
| CDY59491 | Canola | cytosol | 27.46 | 27.06 |
| CDY07764 | Canola | plastid | 27.46 | 27.06 |
| CDX93344 | Canola | plastid | 27.46 | 26.67 |
| CDY18420 | Canola | plastid | 27.46 | 26.67 |
| CDX94361 | Canola | cytosol | 26.27 | 26.35 |
| CDY68466 | Canola | cytosol | 25.97 | 26.13 |
| CDY13155 | Canola | cytosol | 27.16 | 26.0 |
| CDX76183 | Canola | cytosol | 27.16 | 26.0 |
| CDY67915 | Canola | cytosol | 19.4 | 25.79 |
| CDY66909 | Canola | cytosol, mitochondrion, plastid | 9.25 | 25.41 |
| CDY41199 | Canola | plastid | 26.87 | 25.0 |
| CDX68841 | Canola | cytosol | 28.06 | 24.93 |
| CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 27.76 | 24.35 |
| CDX97455 | Canola | plastid | 10.75 | 23.84 |
| CDY11524 | Canola | cytosol | 27.76 | 23.37 |
| CDX76755 | Canola | cytosol | 27.46 | 23.17 |
| CDY29805 | Canola | cytosol | 23.28 | 22.41 |
| CDY25400 | Canola | cytosol, plastid | 23.28 | 22.41 |
| CDX82257 | Canola | cytosol | 22.69 | 21.84 |
| CDX80771 | Canola | cytosol, plastid | 26.27 | 21.78 |
| CDY11199 | Canola | plastid | 26.27 | 21.73 |
| CDY23168 | Canola | plastid | 24.48 | 21.52 |
| CDX95305 | Canola | plastid | 24.48 | 21.52 |
| CDY36050 | Canola | cytosol, plastid | 22.09 | 21.26 |
| CDX68026 | Canola | plastid | 22.69 | 19.14 |
| CDX79251 | Canola | plastid | 22.69 | 19.1 |
| CDY31292 | Canola | cytosol | 19.1 | 18.29 |
| CDY14527 | Canola | plastid | 22.69 | 18.23 |
| CDY08834 | Canola | plastid | 22.69 | 18.18 |
| CDY55175 | Canola | cytosol | 24.18 | 17.31 |
| CDY14050 | Canola | cytosol | 24.18 | 17.31 |
| CDX86953 | Canola | cytosol | 24.48 | 17.19 |
| CDY00231 | Canola | cytosol | 24.48 | 17.19 |
| CDX70028 | Canola | cytosol | 20.3 | 17.13 |
| CDX71683 | Canola | cytosol | 25.37 | 17.0 |
| CDY05832 | Canola | cytosol | 25.37 | 17.0 |
| CDY33993 | Canola | plastid | 17.61 | 16.53 |
| CDX98981 | Canola | endoplasmic reticulum, golgi | 18.51 | 14.55 |
| CDY39471 | Canola | cytosol | 16.42 | 13.72 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:A0A078G5E6 | UniProt:A0A078G5E6 | EnsemblPlants:CDY19928 | ProteinID:CDY19928 |
| ProteinID:CDY19928.1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00009730001 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier |
| InterPro:Mt_carrier_dom_sf | PFAM:PF00153 | PRINTS:PR00926 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF646 |
| SUPFAM:SSF103506 | UniParc:UPI0004EF3A56 | : | : | : | : |
Description
BnaA09g03230DBnaA09g03230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5E6]
Coordinates
chrLK032102:+:1844..4037
Molecular Weight (calculated)
37200.1 Da
IEP (calculated)
9.818
GRAVY (calculated)
-0.036
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAVDDDPGQ IKRALIDASA GAISGAVSRT VTSPLDVIKI RFQVQLEPTT SWSMVRGNLS GASKYTGMFQ ATKDIFREEG FRGFWRGNVP ALLMVMPYTS
101: IQFTVLHKLK SFASGSTKTE DHIHLSPYLS FISGALAGCA ATLGSYPFDL LRTILASQGE PKVYPTMRSA FVDIIKSRGV RGLYNGLTPT LVEIVPYAGL
201: QFGTYDMFKR WMMDWNRYML SSKDQINVDT NLSSFQLFVC GLGAGTSAKL VCHPLDVVKK RFQIEGLQRH PRYGARLEQR AYRNMLDGLK QILMSEGWHG
301: LYKGIVPSTV KAAPAGAVTF VAYEFTSDWL ESISW
101: IQFTVLHKLK SFASGSTKTE DHIHLSPYLS FISGALAGCA ATLGSYPFDL LRTILASQGE PKVYPTMRSA FVDIIKSRGV RGLYNGLTPT LVEIVPYAGL
201: QFGTYDMFKR WMMDWNRYML SSKDQINVDT NLSSFQLFVC GLGAGTSAKL VCHPLDVVKK RFQIEGLQRH PRYGARLEQR AYRNMLDGLK QILMSEGWHG
301: LYKGIVPSTV KAAPAGAVTF VAYEFTSDWL ESISW
001: MIPTTATVDD EPGQIKRALI DASAGAISGG VSRSVTSPLD VIKIRFQVQL EPTTSWGLVR GNLSGASKYT GMVQATKDIF REEGFRGFWR GNVPALLMVM
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW
101: PYTSIQFTVL HKLKSFASGS TKTEDHIHLS PYLSFVSGAL AGCAATLGSY PFDLLRTILA SQGEPKVYPT MRSAFVDIIQ SRGIRGLYNG LTPTLVEIVP
201: YAGLQFGTYD MFKRWMMDWN RYKLSSKIPI NVDTNLSSFQ LFICGLGAGT SAKLVCHPLD VVKKRFQIEG LQRHPRYGAR VERRAYRNML DGLRQIMISE
301: GWHGLYKGIV PSTVKAAPAG AVTFVAYEFT SDWLESISW
Arabidopsis Description
Mitochondrial thiamine diphosphate carrier 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI73]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.