Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76183 | Canola | cytosol | 99.14 | 99.14 |
| AT3G53940.1 | Thale cress | cytosol | 84.0 | 80.55 |
| CDY07764 | Canola | plastid | 72.0 | 74.12 |
| CDY59491 | Canola | cytosol | 71.71 | 73.82 |
| CDY18420 | Canola | plastid | 71.43 | 72.46 |
| CDX93344 | Canola | plastid | 71.43 | 72.46 |
| VIT_08s0007g01280.t01 | Wine grape | cytosol | 68.29 | 71.13 |
| KRH65929 | Soybean | cytosol, mitochondrion, peroxisome | 66.29 | 69.67 |
| PGSC0003DMT400062351 | Potato | cytosol | 64.57 | 64.2 |
| Solyc09g011360.2.1 | Tomato | cytosol, peroxisome, plastid | 64.86 | 63.94 |
| CDY40244 | Canola | plastid | 60.57 | 63.28 |
| GSMUA_Achr10P... | Banana | cytosol | 60.57 | 62.91 |
| Os01t0143100-01 | Rice | mitochondrion | 56.57 | 61.49 |
| GSMUA_Achr8P02430_001 | Banana | cytosol | 61.43 | 61.25 |
| Zm00001d039884_P002 | Maize | cytosol | 57.14 | 60.98 |
| Zm00001d047838_P001 | Maize | cytosol | 59.43 | 60.64 |
| EES00336 | Sorghum | cytosol | 57.14 | 60.61 |
| OQU92863 | Sorghum | cytosol | 59.71 | 60.4 |
| Os03t0267700-01 | Rice | cytosol | 58.86 | 59.54 |
| OQU92679 | Sorghum | cytosol | 20.86 | 58.87 |
| TraesCS4B01G211000.1 | Wheat | plastid | 56.29 | 58.81 |
| CDY41199 | Canola | plastid | 60.29 | 58.61 |
| HORVU4Hr1G060540.1 | Barley | cytosol | 57.14 | 58.48 |
| TraesCS4A01G093400.1 | Wheat | cytosol | 57.14 | 58.48 |
| TraesCS3A01G058200.1 | Wheat | cytosol, mitochondrion, peroxisome | 54.86 | 58.36 |
| TraesCS3D01G058400.1 | Wheat | cytosol, mitochondrion, peroxisome | 54.86 | 58.36 |
| TraesCS4D01G211700.2 | Wheat | cytosol | 57.14 | 58.31 |
| TraesCS3B01G070700.1 | Wheat | cytosol, mitochondrion, peroxisome | 54.57 | 58.05 |
| GSMUA_Achr6P33950_001 | Banana | plastid | 60.57 | 53.0 |
| HORVU3Hr1G011350.16 | Barley | mitochondrion, plastid | 55.14 | 51.88 |
| CDX68843 | Canola | cytosol | 13.14 | 35.11 |
| CDX94361 | Canola | cytosol | 30.57 | 32.04 |
| CDY01954 | Canola | mitochondrion | 18.0 | 31.98 |
| CDY68466 | Canola | cytosol | 30.29 | 31.83 |
| CDX97455 | Canola | plastid | 13.71 | 31.79 |
| CDX71722 | Canola | cytosol | 30.0 | 31.07 |
| CDX70930 | Canola | cytosol | 17.14 | 30.93 |
| CDY11371 | Canola | cytosol | 29.71 | 30.68 |
| CDY45268 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 27.71 | 29.66 |
| CDX84024 | Canola | cytosol | 27.71 | 29.48 |
| CDX74363 | Canola | cytosol | 29.71 | 29.46 |
| CDX96850 | Canola | cytosol | 27.71 | 29.31 |
| CDX91877 | Canola | cytosol | 29.43 | 29.18 |
| CDY48505 | Canola | cytosol | 29.14 | 29.14 |
| CDY07175 | Canola | cytosol | 29.14 | 29.14 |
| CDY67915 | Canola | cytosol | 20.57 | 28.57 |
| CDY19928 | Canola | cytosol | 26.0 | 27.16 |
| CDY56673 | Canola | cytosol | 26.29 | 27.14 |
| CDX86261 | Canola | cytosol | 26.0 | 27.0 |
| CDX85385 | Canola | cytosol | 26.0 | 27.0 |
| CDX68841 | Canola | cytosol | 28.86 | 26.79 |
| CDX75241 | Canola | cytoskeleton, cytosol, nucleus | 28.86 | 26.44 |
| CDY23168 | Canola | plastid | 28.57 | 26.25 |
| CDX95305 | Canola | plastid | 28.57 | 26.25 |
| CDX76755 | Canola | cytosol | 29.14 | 25.69 |
| CDY11524 | Canola | cytosol | 29.14 | 25.63 |
| CDY66909 | Canola | cytosol, mitochondrion, plastid | 8.57 | 24.59 |
| CDX80771 | Canola | cytosol, plastid | 27.43 | 23.76 |
| CDY11199 | Canola | plastid | 27.43 | 23.7 |
| CDX68026 | Canola | plastid | 26.57 | 23.43 |
| CDX79251 | Canola | plastid | 26.57 | 23.37 |
| CDY14527 | Canola | plastid | 26.57 | 22.3 |
| CDY08834 | Canola | plastid | 26.57 | 22.25 |
| CDY00231 | Canola | cytosol | 29.43 | 21.59 |
| CDX86953 | Canola | cytosol | 29.43 | 21.59 |
| CDY05832 | Canola | cytosol | 30.57 | 21.4 |
| CDX71683 | Canola | cytosol | 30.57 | 21.4 |
| CDY14050 | Canola | cytosol | 28.0 | 20.94 |
| CDY55175 | Canola | cytosol | 27.71 | 20.73 |
| CDY36050 | Canola | cytosol, plastid | 20.57 | 20.69 |
| CDX70028 | Canola | cytosol | 23.43 | 20.65 |
| CDY31292 | Canola | cytosol | 20.57 | 20.57 |
| CDY25400 | Canola | cytosol, plastid | 20.29 | 20.4 |
| CDY29805 | Canola | cytosol | 20.29 | 20.4 |
| CDX82257 | Canola | cytosol | 20.29 | 20.4 |
| CDY33993 | Canola | plastid | 18.0 | 17.65 |
| CDX98981 | Canola | endoplasmic reticulum, golgi | 21.14 | 17.37 |
| CDY39471 | Canola | cytosol | 19.71 | 17.21 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:A0A078FFJ2 | UniProt:A0A078FFJ2 | EnsemblPlants:CDY13155 | ProteinID:CDY13155 |
| ProteinID:CDY13155.1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00071016001 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier |
| InterPro:Mt_carrier_dom_sf | PFAM:PF00153 | PRINTS:PR00926 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF403 |
| SUPFAM:SSF103506 | UniParc:UPI0004EE51D3 | : | : | : | : |
Description
BnaC04g26800DBnaC04g26800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFJ2]
Coordinates
chrLK032032:-:49382..51743
Molecular Weight (calculated)
38039.0 Da
IEP (calculated)
10.379
GRAVY (calculated)
-0.020
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMEARVGVV VEGGQRALHT ATAVNNTVVD AGNRKLLQQQ QSNKPSLNQK QGGSISHLIA GGISGAFAKT CTAPLARLTI LFQIQGMQSE TAILSSPSIW
101: REASRIVNEE GFRAFWKGNL VTVAHRLPYS AVNFYAYEEY NTLFYSNPVL KRYKGNASLD VLVHFVSGGL AGMTAASATY PLDLVRTRLS AQRSSMYYQG
201: VGHAFRTIIR EEGFWGLYKG LGATLLGVGP SLAISFSAYN SLKTSWLSHR PNDSEVMVSL SCGSLSGIAS STATFPVDLV RRRMQLEGAG GRARVYKTGL
301: LGTFKHIFKA EGMRGLYRGI LPEYYKVAPG VGIAFMAYEK LKKLLSSVPN
101: REASRIVNEE GFRAFWKGNL VTVAHRLPYS AVNFYAYEEY NTLFYSNPVL KRYKGNASLD VLVHFVSGGL AGMTAASATY PLDLVRTRLS AQRSSMYYQG
201: VGHAFRTIIR EEGFWGLYKG LGATLLGVGP SLAISFSAYN SLKTSWLSHR PNDSEVMVSL SCGSLSGIAS STATFPVDLV RRRMQLEGAG GRARVYKTGL
301: LGTFKHIFKA EGMRGLYRGI LPEYYKVAPG VGIAFMAYEK LKKLLSSVPN
001: MEARVGVVVE GGQRALNTAT TTAVHNTVVD AGNRKLLQQQ PQTQQTQSCH QHHQSNKQSL NQQQGHFGTV ERLLAGGIAG AFSKTCTAPL ARLTILFQIQ
101: GMQSEAAILS SPNIWHEASR IVKEEGFRAF WKGNLVTVAH RLPYGAVNFY AYEEYKTFLH SNPVLQSYKG NAGVDISVHF VSGGLAGLTA ASATYPLDLV
201: RTRLSAQRNS IYYQGVGHAF RTICREEGIL GLYKGLGATL LGVGPSLAIS FAAYETFKTF WLSHRPNDSN AVVSLGCGSL SGIVSSTATF PLDLVRRRMQ
301: LEGAGGRARV YTTGLFGTFK HIFKTEGMRG LYRGIIPEYY KVVPGVGIAF MTFEELKKLL STVPN
101: GMQSEAAILS SPNIWHEASR IVKEEGFRAF WKGNLVTVAH RLPYGAVNFY AYEEYKTFLH SNPVLQSYKG NAGVDISVHF VSGGLAGLTA ASATYPLDLV
201: RTRLSAQRNS IYYQGVGHAF RTICREEGIL GLYKGLGATL LGVGPSLAIS FAAYETFKTF WLSHRPNDSN AVVSLGCGSL SGIVSSTATF PLDLVRRRMQ
301: LEGAGGRARV YTTGLFGTFK HIFKTEGMRG LYRGIIPEYY KVVPGVGIAF MTFEELKKLL STVPN
Arabidopsis Description
Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4M2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.