Factsheet for Zm00001d047838_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92863	Sorghum	cytosol	98.54	97.69
Os03t0267700-01	Rice	cytosol	92.42	91.62
OQU92679	Sorghum	cytosol	31.78	87.9
TraesCS4D01G211700.2	Wheat	cytosol	85.13	85.13
TraesCS4A01G093400.1	Wheat	cytosol	84.84	85.09
TraesCS4B01G211000.1	Wheat	plastid	83.09	85.07
HORVU4Hr1G060540.1	Barley	cytosol	83.67	83.92
GSMUA_Achr8P02430_001	Banana	cytosol	79.01	77.21
GSMUA_Achr10P...	Banana	cytosol	72.3	73.59
KRH49196	Soybean	endoplasmic reticulum	58.31	72.73
VIT_08s0007g01280.t01	Wine grape	cytosol	69.39	70.83
KRH00061	Soybean	cytosol	68.22	70.48
KRH15037	Soybean	cytosol	66.76	70.25
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	67.93	69.97
Zm00001d039884_P002	Maize	cytosol	66.18	69.21
KRH73096	Soybean	cytosol	65.31	68.5
VIT_13s0019g02440.t01	Wine grape	cytosol	71.14	67.59
PGSC0003DMT400062351	Potato	cytosol	68.8	67.05
Solyc09g011360.2.1	Tomato	cytosol, peroxisome, plastid	69.1	66.76
GSMUA_Achr6P33950_001	Banana	plastid	76.97	66.0
AT3G55640.4	Thale cress	plastid	63.85	65.96
CDY40244	Canola	plastid	62.39	63.88
CDY07764	Canola	plastid	61.52	62.06
Bra000026.1-P	Field mustard	plastid	61.52	62.06
CDY59491	Canola	cytosol	60.64	61.18
Bra007181.1-P	Field mustard	plastid	62.39	60.11
CDY18420	Canola	plastid	60.35	60.0
CDY41199	Canola	plastid	62.68	59.72
CDX93344	Canola	plastid	60.06	59.71
Bra017151.1-P	Field mustard	plastid	60.06	59.71
CDY13155	Canola	cytosol	60.64	59.43
CDX76183	Canola	cytosol	60.64	59.43
Bra014855.1-P	Field mustard	cytosol	61.81	59.22
AT3G53940.1	Thale cress	cytosol	62.97	59.18
AT2G37890.1	Thale cress	cytosol	57.14	58.16
Zm00001d049104_P001	Maize	cytosol, mitochondrion, plastid	17.49	31.58
Zm00001d011226_P002	Maize	plastid	30.61	30.88
Zm00001d011697_P001	Maize	peroxisome	29.45	30.42
Zm00001d016299_P001	Maize	cytosol, mitochondrion, plastid	29.45	30.15
Zm00001d028008_P001	Maize	mitochondrion	19.53	24.72
Zm00001d009799_P001	Maize	plastid	27.7	23.4
Zm00001d040351_P005	Maize	mitochondrion	27.7	23.4
Zm00001d042213_P004	Maize	cytosol, plastid	25.95	23.06
Zm00001d037640_P001	Maize	plastid	26.82	22.66
Zm00001d046400_P002	Maize	mitochondrion	27.41	22.38
Zm00001d053640_P001	Maize	plasma membrane	33.82	21.93
Zm00001d052515_P001	Maize	cytosol	9.33	21.92
Zm00001d011918_P002	Maize	cytosol	25.36	21.75
Zm00001d046509_P002	Maize	plastid	34.11	21.2
Zm00001d015746_P001	Maize	plastid	25.95	20.37
Zm00001d020980_P001	Maize	cytosol	22.16	20.32
Zm00001d031527_P001	Maize	cytosol	22.16	20.0
Zm00001d014331_P001	Maize	cytosol	9.62	19.64
Zm00001d028009_P001	Maize	peroxisome	24.2	19.53
Zm00001d048218_P001	Maize	endoplasmic reticulum	24.49	19.4
Zm00001d022406_P002	Maize	cytosol	21.57	19.12
Zm00001d009318_P001	Maize	cytosol	5.54	16.81
Zm00001d014170_P001	Maize	cytosol	7.58	13.54

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	ProteinID:AQL07762.1	UniProt:B4FRA0	EMBL:BT039638	EMBL:BT043368
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF403	SUPFAM:SSF103506	UniParc:UPI00017B7B5F
EnsemblPlantsGene:Zm00001d047838	EnsemblPlants:Zm00001d047838_P001	EnsemblPlants:Zm00001d047838_T001	SEG:seg	:	:

Description

Mitochondrial substrate carrier family protein

Coordinates

chr9:-:142887493..142890734

Molecular Weight (calculated)

37217.0 Da

IEP (calculated)

9.620

GRAVY (calculated)

0.030

Length

343 amino acids

Sequence
(BLAST)

001: MQTEARVGMA AATMDGTGAA ASAARRYTTQ QQQQQQLQHH QPQLGTVPHL LAGGVAGAVS KTCTAPLARL TILFQVQGMH SDVATMRNTS IWREASRIVY
101: EEGFRAFWKG NLVTIAHRLP YSSISFYAYE RYKNLLQMLP GLEKNGGFGA DVGVRLLGGG LSGITAASAT YPLDLVRTRL AAQTNTAYYR GISHALYAIC
201: RDEGVRGLYK GLGATLLGVG PSIAVSFSVY ETLRSHWQIE RPCDSPVLIS LACGSLSGIA SSTFTFPLDL VRRRMQLEGA AGRARVYQTG LFGTFGHIVR
301: TEGFRGMYRG ILPEYCKVVP GVGIVFMTYE MLKAILTGLE SDD

Best Arabidopsis Sequence Match ( AT3G53940.1 )
(BLAST)

001: MEARVGVVVE GGQRALNTAT TTAVHNTVVD AGNRKLLQQQ PQTQQTQSCH QHHQSNKQSL NQQQGHFGTV ERLLAGGIAG AFSKTCTAPL ARLTILFQIQ
101: GMQSEAAILS SPNIWHEASR IVKEEGFRAF WKGNLVTVAH RLPYGAVNFY AYEEYKTFLH SNPVLQSYKG NAGVDISVHF VSGGLAGLTA ASATYPLDLV
201: RTRLSAQRNS IYYQGVGHAF RTICREEGIL GLYKGLGATL LGVGPSLAIS FAAYETFKTF WLSHRPNDSN AVVSLGCGSL SGIVSSTATF PLDLVRRRMQ
301: LEGAGGRARV YTTGLFGTFK HIFKTEGMRG LYRGIIPEYY KVVPGVGIAF MTFEELKKLL STVPN

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4M2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.