Factsheet for Bra014855.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76183	Canola	cytosol	97.49	99.71
AT3G53940.1	Thale cress	cytosol	83.24	81.64
Bra000026.1-P	Field mustard	plastid	71.23	75.0
Bra017151.1-P	Field mustard	plastid	70.39	73.04
VIT_08s0007g01280.t01	Wine grape	cytosol	67.88	72.32
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	65.08	69.97
PGSC0003DMT400062351	Potato	cytosol	63.97	65.06
Solyc09g011360.2.1	Tomato	cytosol, peroxisome, plastid	64.25	64.79
GSMUA_Achr10P...	Banana	cytosol	59.22	62.91
GSMUA_Achr8P02430_001	Banana	cytosol	60.61	61.82
Zm00001d047838_P001	Maize	cytosol	59.22	61.81
OQU92863	Sorghum	cytosol	59.5	61.56
Os01t0143100-01	Rice	mitochondrion	55.31	61.49
Zm00001d039884_P002	Maize	cytosol	56.15	61.28
EES00336	Sorghum	cytosol	56.15	60.91
Os03t0267700-01	Rice	cytosol	58.38	60.4
Bra007181.1-P	Field mustard	plastid	59.78	60.11
TraesCS4B01G211000.1	Wheat	plastid	56.15	60.0
HORVU4Hr1G060540.1	Barley	cytosol	56.98	59.65
TraesCS4D01G211700.2	Wheat	cytosol	56.98	59.48
TraesCS4A01G093400.1	Wheat	cytosol	56.7	59.36
OQU92679	Sorghum	cytosol	20.39	58.87
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	53.91	58.66
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	53.91	58.66
TraesCS3B01G070700.1	Wheat	cytosol, mitochondrion, peroxisome	53.63	58.36
GSMUA_Achr6P33950_001	Banana	plastid	58.94	52.75
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	54.19	52.15
Bra026457.1-P	Field mustard	cytosol	29.05	31.14
Bra007623.1-P	Field mustard	cytosol	28.77	30.38
Bra000944.1-P	Field mustard	cytosol	29.05	29.46
Bra037383.1-P	Field mustard	cytosol	28.49	29.14
Bra026206.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	26.54	29.05
Bra016697.1-P	Field mustard	cytosol	26.54	28.7
Bra031891.1-P	Field mustard	cytosol	20.95	27.78
Bra036153.1-P	Field mustard	cytosol	25.42	27.16
Bra033473.1-P	Field mustard	plastid	27.93	26.25
Bra011344.1-P	Field mustard	cytosol	27.65	25.92
Bra007793.1-P	Field mustard	cytosol	28.21	25.38
Bra005684.1-P	Field mustard	plastid	26.82	23.76
Bra003653.1-P	Field mustard	plastid	25.7	23.17
Bra024342.1-P	Field mustard	plastid	25.98	22.25
Bra019615.1-P	Field mustard	cytosol	28.77	21.59
Bra035722.1-P	Field mustard	cytosol	29.61	21.24
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	17.88	20.85
Bra028702.1-P	Field mustard	cytosol	27.09	20.73
Bra035801.1-P	Field mustard	cytosol	20.11	20.69
Bra009271.1-P	Field mustard	cytosol	23.74	19.72
Bra001780.1-P	Field mustard	cytosol	13.97	18.18

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EnsemblPlantsGene:Bra014855	EnsemblPlants:Bra014855.1	EnsemblPlants:Bra014855.1-P	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108
InterPro:IPR023395	UniProt:M4DED4	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF403	SUPFAM:SSF103506	UniParc:UPI00025450B5
SEG:seg	:	:	:	:	:

Description

AT3G53940 (E=7e-144) | mitochondrial substrate carrier family protein

Coordinates

chrA04:+:3627007..3629074

Molecular Weight (calculated)

38896.0 Da

IEP (calculated)

10.357

GRAVY (calculated)

-0.056

Length

358 amino acids

Sequence
(BLAST)

001: MTMEARVGVV VEGGQRALHT ATAVNNTVVD AGNRKLLQQQ PQTCQQQQQS NKPSLNQKQG GSISHLVAGG ISGAFAKTCT APLARLTILF QIQGMQSETA
101: ILSSPSIWRE ASRIVNEEGF RAFWKGNLVT VAHRLPYSAV NFYAYEEYNT LFYSNPVLKR FKGNASLDVL VHFVSGGLAG MTAASATYPL DLVRTRLSAQ
201: RSSMYYQGVG HAFRTIIREE GFWGLYKGLG ATLLGVGPSL AISFSAYNSL KTSWLSHRPS DSEVMVSLSC GSLSGIASST ATFPVDLVRR RMQLEGAGGR
301: ARVYKTGLLG TFKHIFKAEG MRGLYRGILP EYYKVAPGVG IAFMAYEKLK KLLSSAPN

Best Arabidopsis Sequence Match ( AT3G53940.1 )
(BLAST)

001: MEARVGVVVE GGQRALNTAT TTAVHNTVVD AGNRKLLQQQ PQTQQTQSCH QHHQSNKQSL NQQQGHFGTV ERLLAGGIAG AFSKTCTAPL ARLTILFQIQ
101: GMQSEAAILS SPNIWHEASR IVKEEGFRAF WKGNLVTVAH RLPYGAVNFY AYEEYKTFLH SNPVLQSYKG NAGVDISVHF VSGGLAGLTA ASATYPLDLV
201: RTRLSAQRNS IYYQGVGHAF RTICREEGIL GLYKGLGATL LGVGPSLAIS FAAYETFKTF WLSHRPNDSN AVVSLGCGSL SGIVSSTATF PLDLVRRRMQ
301: LEGAGGRARV YTTGLFGTFK HIFKTEGMRG LYRGIIPEYY KVVPGVGIAF MTFEELKKLL STVPN

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4M2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.