Factsheet for Bra000026.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07764	Canola	plastid	100.0	100.0
Bra017151.1-P	Field mustard	plastid	91.47	90.14
AT2G37890.1	Thale cress	cytosol	76.18	76.85
Bra014855.1-P	Field mustard	cytosol	75.0	71.23
VIT_08s0007g01280.t01	Wine grape	cytosol	69.71	70.54
KRH65929	Soybean	cytosol, mitochondrion, peroxisome	67.06	68.47
PGSC0003DMT400062351	Potato	cytosol	67.35	65.06
Solyc09g011360.2.1	Tomato	cytosol, peroxisome, plastid	67.35	64.51
Os01t0143100-01	Rice	mitochondrion	58.53	61.8
Zm00001d047838_P001	Maize	cytosol	62.06	61.52
OQU92863	Sorghum	cytosol	62.35	61.27
Os03t0267700-01	Rice	cytosol	61.76	60.69
GSMUA_Achr10P...	Banana	cytosol	60.0	60.53
TraesCS4B01G211000.1	Wheat	plastid	59.41	60.3
GSMUA_Achr8P02430_001	Banana	cytosol	62.06	60.11
Bra007181.1-P	Field mustard	plastid	62.94	60.11
Zm00001d039884_P002	Maize	cytosol	57.94	60.06
TraesCS4D01G211700.2	Wheat	cytosol	60.59	60.06
TraesCS4A01G093400.1	Wheat	cytosol	60.0	59.65
HORVU4Hr1G060540.1	Barley	cytosol	60.0	59.65
EES00336	Sorghum	cytosol	57.65	59.39
TraesCS3A01G058200.1	Wheat	cytosol, mitochondrion, peroxisome	56.47	58.36
TraesCS3D01G058400.1	Wheat	cytosol, mitochondrion, peroxisome	56.47	58.36
TraesCS3B01G070700.1	Wheat	cytosol, mitochondrion, peroxisome	55.88	57.75
OQU92679	Sorghum	cytosol	20.59	56.45
GSMUA_Achr6P33950_001	Banana	plastid	61.47	52.25
HORVU3Hr1G011350.16	Barley	mitochondrion, plastid	56.76	51.88
Bra026457.1-P	Field mustard	cytosol	33.53	34.13
Bra007623.1-P	Field mustard	cytosol	33.53	33.63
Bra026206.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	31.47	32.72
Bra016697.1-P	Field mustard	cytosol	31.76	32.63
Bra037383.1-P	Field mustard	cytosol	33.24	32.29
Bra000944.1-P	Field mustard	cytosol	32.94	31.73
Bra031891.1-P	Field mustard	cytosol	22.94	28.89
Bra036153.1-P	Field mustard	cytosol	27.06	27.46
Bra011344.1-P	Field mustard	cytosol	30.29	26.96
Bra007793.1-P	Field mustard	cytosol	30.29	25.88
Bra033473.1-P	Field mustard	plastid	28.24	25.2
Bra003653.1-P	Field mustard	plastid	29.41	25.19
Bra005684.1-P	Field mustard	plastid	27.65	23.27
Bra024342.1-P	Field mustard	plastid	28.24	22.97
Bra035722.1-P	Field mustard	cytosol	32.94	22.44
Bra028702.1-P	Field mustard	cytosol	30.88	22.44
Bra019615.1-P	Field mustard	cytosol	30.88	22.01
Bra009271.1-P	Field mustard	cytosol	27.65	21.81
Bra035801.1-P	Field mustard	cytosol	22.06	21.55
Bra037443.1-P	Field mustard	cytosol, mitochondrion, plastid	18.24	20.2
Bra001780.1-P	Field mustard	cytosol	15.0	18.55

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EnsemblPlantsGene:Bra000026	EnsemblPlants:Bra000026.1	EnsemblPlants:Bra000026.1-P	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108
InterPro:IPR023395	UniProt:M4C748	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF403	SUPFAM:SSF103506	UniParc:UPI0002540017

Description

AT2G37890 (E=1e-146) | mitochondrial substrate carrier family protein

Coordinates

chrA03:-:8897179..8899098

Molecular Weight (calculated)

36797.7 Da

IEP (calculated)

10.215

GRAVY (calculated)

0.129

Length

340 amino acids

Sequence
(BLAST)

001: MNIEARVGVA VDGALNPATA VHSSVVDAGA LSLPQKQPQS RFGTVENLLA GGIAGAFSKT CTAPLARLTI LFQLQGMQSE AAVLGKPSLW REASRILNEE
101: GFRAFWKGNL VTVAHRLPYS ALNFYAYEKY NKFLYSNPVL QSYLGNARSS PFVHFVSGGL AGITAASATY PLDLVRTRLA AQRNAMYYQG IGHAFRTICR
201: EEGFLGLYKG LGATMLGVGP TLAINFASYE SLKSFWLSRR PDDSTLIISL GCGSLAGVAS STATFPLDLV RRRMQVEGAG GRARVYKTGL FGTFKHIFRS
301: EGIRGLYRGL LPEYFKVVPG VGITFMVYES LKMLLSPPAP

Best Arabidopsis Sequence Match ( AT3G53940.1 )
(BLAST)

001: MEARVGVVVE GGQRALNTAT TTAVHNTVVD AGNRKLLQQQ PQTQQTQSCH QHHQSNKQSL NQQQGHFGTV ERLLAGGIAG AFSKTCTAPL ARLTILFQIQ
101: GMQSEAAILS SPNIWHEASR IVKEEGFRAF WKGNLVTVAH RLPYGAVNFY AYEEYKTFLH SNPVLQSYKG NAGVDISVHF VSGGLAGLTA ASATYPLDLV
201: RTRLSAQRNS IYYQGVGHAF RTICREEGIL GLYKGLGATL LGVGPSLAIS FAAYETFKTF WLSHRPNDSN AVVSLGCGSL SGIVSSTATF PLDLVRRRMQ
301: LEGAGGRARV YTTGLFGTFK HIFKTEGMRG LYRGIIPEYY KVVPGVGIAF MTFEELKKLL STVPN

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4M2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.