Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000026.1-P | Field mustard | plastid | 76.85 | 76.18 |
| CDY07764 | Canola | plastid | 76.85 | 76.18 |
| CDY59491 | Canola | cytosol | 76.85 | 76.18 |
| Bra017151.1-P | Field mustard | plastid | 77.15 | 75.36 |
| CDY18420 | Canola | plastid | 77.15 | 75.36 |
| CDX93344 | Canola | plastid | 76.85 | 75.07 |
| AT3G53940.1 | Thale cress | cytosol | 74.48 | 68.77 |
| VIT_08s0007g01280.t01 | Wine grape | cytosol | 65.28 | 65.48 |
| KRH65929 | Soybean | cytosol, mitochondrion, peroxisome | 64.39 | 65.17 |
| AT3G55640.4 | Thale cress | plastid | 59.35 | 60.24 |
| PGSC0003DMT400062351 | Potato | cytosol | 62.31 | 59.66 |
| Solyc09g011360.2.1 | Tomato | cytosol, peroxisome, plastid | 62.31 | 59.15 |
| Zm00001d047838_P001 | Maize | cytosol | 58.16 | 57.14 |
| Os01t0143100-01 | Rice | mitochondrion | 54.6 | 57.14 |
| OQU92863 | Sorghum | cytosol | 58.16 | 56.65 |
| GSMUA_Achr10P... | Banana | cytosol | 56.38 | 56.38 |
| Zm00001d039884_P002 | Maize | cytosol | 54.6 | 56.1 |
| EES00336 | Sorghum | cytosol | 54.3 | 55.45 |
| Os03t0267700-01 | Rice | cytosol | 56.38 | 54.91 |
| TraesCS4B01G211000.1 | Wheat | plastid | 54.3 | 54.63 |
| TraesCS3D01G058400.1 | Wheat | cytosol, mitochondrion, peroxisome | 53.12 | 54.41 |
| TraesCS3A01G058200.1 | Wheat | cytosol, mitochondrion, peroxisome | 53.12 | 54.41 |
| TraesCS4D01G211700.2 | Wheat | cytosol | 55.19 | 54.23 |
| GSMUA_Achr8P02430_001 | Banana | cytosol | 56.38 | 54.13 |
| TraesCS3B01G070700.1 | Wheat | cytosol, mitochondrion, peroxisome | 52.82 | 54.1 |
| TraesCS4A01G093400.1 | Wheat | cytosol | 54.6 | 53.8 |
| HORVU4Hr1G060540.1 | Barley | cytosol | 54.3 | 53.51 |
| OQU92679 | Sorghum | cytosol | 18.69 | 50.81 |
| HORVU3Hr1G011350.16 | Barley | mitochondrion, plastid | 53.41 | 48.39 |
| GSMUA_Achr6P33950_001 | Banana | plastid | 55.79 | 47.0 |
| AT4G26180.1 | Thale cress | cytosol | 32.05 | 32.63 |
| AT1G14560.1 | Thale cress | cytosol | 29.97 | 30.51 |
| AT4G01100.2 | Thale cress | cytosol | 30.86 | 28.42 |
| AT3G21390.2 | Thale cress | cytosol | 28.19 | 26.61 |
| AT3G51870.1 | Thale cress | plastid | 29.08 | 25.72 |
| AT5G48970.1 | Thale cress | cytosol | 25.82 | 25.66 |
| AT4G32400.1 | Thale cress | cytosol | 29.67 | 25.51 |
| AT5G01500.1 | Thale cress | cytosol | 29.38 | 23.86 |
| AT1G78180.1 | Thale cress | plastid | 28.19 | 22.73 |
| AT3G20240.1 | Thale cress | cytosol | 22.55 | 21.84 |
| AT5G51050.1 | Thale cress | cytosol | 32.05 | 21.69 |
| AT5G64970.1 | Thale cress | cytosol, mitochondrion, plastid | 27.3 | 21.5 |
| AT5G07320.1 | Thale cress | cytosol | 29.67 | 20.88 |
| AT5G61810.1 | Thale cress | cytosol | 29.38 | 20.71 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | EntrezGene:818365 | UniProt:A0A178VTK8 | ProteinID:AEC09462.1 | EMBL:AK175138 |
| EMBL:AK175263 | ArrayExpress:AT2G37890 | EnsemblPlantsGene:AT2G37890 | RefSeq:AT2G37890 | TAIR:AT2G37890 | RefSeq:AT2G37890-TAIR-G |
| EnsemblPlants:AT2G37890.1 | TAIR:AT2G37890.1 | EMBL:AY128317 | Unigene:At.37361 | EMBL:BT000042 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005743 | GO:GO:0006810 | GO:GO:0006839 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier |
| InterPro:Mt_carrier_dom_sf | RefSeq:NP_181325.2 | ProteinID:OAP09128.1 | PFAM:PF00153 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007057 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00926 | PFscan:PS50920 | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF403 | UniProt:Q8L7R0 | SUPFAM:SSF103506 | UniParc:UPI00000AC454 | SEG:seg | : |
Description
Mitochondrial carrier like protein [Source:UniProtKB/TrEMBL;Acc:Q8L7R0]
Coordinates
chr2:-:15861688..15864128
Molecular Weight (calculated)
36595.3 Da
IEP (calculated)
10.113
GRAVY (calculated)
0.111
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVDARVGVA VDGAQSALNT ATTVHSSVVM TQIKPQAKLG TFQNLLAGGI AGAISKTCTA PLARLTILFQ LQGMQSEGAV LSRPNLRREA SRIINEEGYR
101: AFWKGNLVTV VHRIPYTAVN FYAYEKYNLF FNSNPVVQSF IGNTSGNPIV HFVSGGLAGI TAATATYPLD LVRTRLAAQR NAIYYQGIEH TFRTICREEG
201: ILGLYKGLGA TLLGVGPSLA INFAAYESMK LFWHSHRPND SDLVVSLVSG GLAGAVSSTA TYPLDLVRRR MQVEGAGGRA RVYNTGLFGT FKHIFKSEGF
301: KGIYRGILPE YYKVVPGVGI VFMTYDALRR LLTSLPD
101: AFWKGNLVTV VHRIPYTAVN FYAYEKYNLF FNSNPVVQSF IGNTSGNPIV HFVSGGLAGI TAATATYPLD LVRTRLAAQR NAIYYQGIEH TFRTICREEG
201: ILGLYKGLGA TLLGVGPSLA INFAAYESMK LFWHSHRPND SDLVVSLVSG GLAGAVSSTA TYPLDLVRRR MQVEGAGGRA RVYNTGLFGT FKHIFKSEGF
301: KGIYRGILPE YYKVVPGVGI VFMTYDALRR LLTSLPD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.