Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plasma membrane 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71683 | Canola | cytosol | 93.17 | 92.8 |
| Bra035722.1-P | Field mustard | cytosol | 92.97 | 92.79 |
| CDY05832 | Canola | cytosol | 92.97 | 92.6 |
| KRH41046 | Soybean | cytosol | 75.7 | 76.63 |
| KRH59718 | Soybean | cytosol | 76.31 | 76.0 |
| PGSC0003DMT400074454 | Potato | plastid | 26.71 | 74.3 |
| KRH63894 | Soybean | cytosol | 69.68 | 74.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 76.31 | 73.93 |
| AT5G07320.1 | Thale cress | cytosol | 71.08 | 73.9 |
| PGSC0003DMT400036927 | Potato | cytosol | 72.49 | 73.82 |
| KRH54061 | Soybean | cytosol | 70.28 | 73.53 |
| Solyc06g068720.2.1 | Tomato | cytosol | 73.49 | 73.2 |
| Solyc03g118090.2.1 | Tomato | cytosol | 72.69 | 72.11 |
| GSMUA_Achr8P26070_001 | Banana | cytosol | 74.5 | 72.04 |
| GSMUA_Achr5P05990_001 | Banana | cytosol | 73.09 | 70.82 |
| EER88619 | Sorghum | cytosol, plastid | 71.69 | 68.92 |
| VIT_17s0000g00030.t01 | Wine grape | plastid | 75.7 | 68.8 |
| Os06t0604500-01 | Rice | nucleus | 70.88 | 68.54 |
| TraesCS7B01G278000.1 | Wheat | cytosol, plastid | 70.48 | 68.16 |
| TraesCS7A01G376600.1 | Wheat | cytosol, plastid | 70.68 | 67.69 |
| TraesCS7D01G372900.1 | Wheat | cytosol, plastid | 70.48 | 67.63 |
| AT5G61810.1 | Thale cress | cytosol | 64.86 | 67.57 |
| HORVU7Hr1G090020.9 | Barley | mitochondrion | 70.28 | 66.92 |
| KXG29744 | Sorghum | plastid | 68.47 | 64.58 |
| Zm00001d046509_P002 | Maize | plastid | 70.88 | 63.95 |
| Zm00001d053640_P001 | Maize | plasma membrane | 67.67 | 63.71 |
| Os02t0201500-00 | Rice | plastid | 67.67 | 58.1 |
| AT4G01100.2 | Thale cress | cytosol | 24.1 | 32.79 |
| AT2G37890.1 | Thale cress | cytosol | 21.69 | 32.05 |
| AT3G55640.4 | Thale cress | plastid | 21.29 | 31.93 |
| AT3G53940.1 | Thale cress | cytosol | 23.29 | 31.78 |
| AT4G26180.1 | Thale cress | cytosol | 21.08 | 31.72 |
| AT1G14560.1 | Thale cress | cytosol | 19.48 | 29.31 |
| AT4G32400.1 | Thale cress | cytosol | 20.88 | 26.53 |
| AT3G51870.1 | Thale cress | plastid | 20.28 | 26.51 |
| AT5G01500.1 | Thale cress | cytosol | 20.68 | 24.82 |
| AT5G48970.1 | Thale cress | cytosol | 16.87 | 24.78 |
| AT5G64970.1 | Thale cress | cytosol, mitochondrion, plastid | 20.28 | 23.6 |
| AT3G21390.2 | Thale cress | cytosol | 16.87 | 23.53 |
| AT1G78180.1 | Thale cress | plastid | 18.88 | 22.49 |
| AT3G20240.1 | Thale cress | cytosol | 15.06 | 21.55 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.50.40.10 | MapMan:24.2.13 | EntrezGene:835178 | ProteinID:AED96027.2 | ArrayExpress:AT5G51050 |
| EnsemblPlantsGene:AT5G51050 | RefSeq:AT5G51050 | TAIR:AT5G51050 | RefSeq:AT5G51050-TAIR-G | EnsemblPlants:AT5G51050.1 | TAIR:AT5G51050.1 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | UniProt:F4KBU1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005347 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006810 | GO:GO:0006839 | GO:GO:0008150 |
| GO:GO:0015114 | GO:GO:0015217 | GO:GO:0015866 | GO:GO:0015867 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0035435 | GO:GO:0055085 | GO:GO:0080121 | GO:GO:0080122 | InterPro:IPR002048 | InterPro:IPR018108 |
| InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | RefSeq:NP_199918.2 | PFAM:PF00153 |
| PFAM:PF13202 | PFAM:PF13833 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00926 |
| ScanProsite:PS00018 | PFscan:PS50222 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF454 | SMART:SM00054 |
| SUPFAM:SSF103506 | SUPFAM:SSF47473 | UniParc:UPI00084843D8 | : | : | : |
Description
Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT5G51050]
Coordinates
chr5:+:20753040..20756137
Molecular Weight (calculated)
55662.3 Da
IEP (calculated)
7.492
GRAVY (calculated)
-0.142
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTTHVGLPT KMEATKSSKQ NCCNPVKKPG PVSIDHVLLA LRETREERDL RIRSLFSFFD SENVGYLDCA QIEKGLCALQ IPSGYKYAKE LFRVCDANRD
101: GRVDYHEFRR YMDDKELELY RIFQAIDVEH NGCISPEGLW DSLVKAGIEI KDEELARFVE HVDKDNDGII MFEEWRDFLL LYPHEATIEN IYHHWERVCL
201: VDIGEQAVIP EGISKHIKRS NYFIAGGIAG AASRTATAPL DRLKVLLQIQ KTDARIREAI KLIWKQGGVR GFFRGNGLNI VKVAPESAIK FYAYELFKNA
301: IGENMGEDKA DIGTTVRLFA GGMAGAVAQA SIYPLDLVKT RLQTYTSQAG VAVPRLGTLT KDILVHEGPR AFYKGLFPSL LGIIPYAGID LAAYETLKDL
401: SRTYILQDAE PGPLVQLGCG TISGALGATC VYPLQVVRTR MQAERARTSM SGVFRRTISE EGYRALYKGL LPNLLKVVPA ASITYMVYEA MKKSLELD
101: GRVDYHEFRR YMDDKELELY RIFQAIDVEH NGCISPEGLW DSLVKAGIEI KDEELARFVE HVDKDNDGII MFEEWRDFLL LYPHEATIEN IYHHWERVCL
201: VDIGEQAVIP EGISKHIKRS NYFIAGGIAG AASRTATAPL DRLKVLLQIQ KTDARIREAI KLIWKQGGVR GFFRGNGLNI VKVAPESAIK FYAYELFKNA
301: IGENMGEDKA DIGTTVRLFA GGMAGAVAQA SIYPLDLVKT RLQTYTSQAG VAVPRLGTLT KDILVHEGPR AFYKGLFPSL LGIIPYAGID LAAYETLKDL
401: SRTYILQDAE PGPLVQLGCG TISGALGATC VYPLQVVRTR MQAERARTSM SGVFRRTISE EGYRALYKGL LPNLLKVVPA ASITYMVYEA MKKSLELD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.