Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40244 | Canola | plastid | 92.17 | 91.34 |
| Bra007181.1-P | Field mustard | plastid | 92.17 | 85.96 |
| CDY41199 | Canola | plastid | 91.57 | 84.44 |
| KRH73096 | Soybean | cytosol | 70.78 | 71.87 |
| KRH15037 | Soybean | cytosol | 69.88 | 71.17 |
| VIT_13s0019g02440.t01 | Wine grape | cytosol | 71.99 | 66.2 |
| Zm00001d047838_P001 | Maize | cytosol | 65.96 | 63.85 |
| HORVU4Hr1G060540.1 | Barley | cytosol | 65.36 | 63.45 |
| TraesCS4B01G211000.1 | Wheat | plastid | 63.86 | 63.28 |
| TraesCS4D01G211700.2 | Wheat | cytosol | 65.36 | 63.27 |
| TraesCS4A01G093400.1 | Wheat | cytosol | 65.06 | 63.16 |
| OQU92863 | Sorghum | cytosol | 65.66 | 63.01 |
| GSMUA_Achr8P02430_001 | Banana | cytosol | 66.57 | 62.96 |
| Os01t0143100-01 | Rice | mitochondrion | 60.54 | 62.42 |
| Zm00001d039884_P002 | Maize | cytosol | 61.45 | 62.2 |
| Os03t0267700-01 | Rice | cytosol | 64.46 | 61.85 |
| GSMUA_Achr10P... | Banana | cytosol | 62.35 | 61.42 |
| EES00336 | Sorghum | cytosol | 60.84 | 61.21 |
| TraesCS3B01G070700.1 | Wheat | cytosol, mitochondrion, peroxisome | 60.54 | 61.09 |
| TraesCS3D01G058400.1 | Wheat | cytosol, mitochondrion, peroxisome | 60.24 | 60.79 |
| TraesCS3A01G058200.1 | Wheat | cytosol, mitochondrion, peroxisome | 60.24 | 60.79 |
| AT2G37890.1 | Thale cress | cytosol | 60.24 | 59.35 |
| AT3G53940.1 | Thale cress | cytosol | 63.86 | 58.08 |
| OQU92679 | Sorghum | cytosol | 20.78 | 55.65 |
| GSMUA_Achr6P33950_001 | Banana | plastid | 66.57 | 55.25 |
| HORVU3Hr1G011350.16 | Barley | mitochondrion, plastid | 60.54 | 54.03 |
| AT4G26180.1 | Thale cress | cytosol | 29.82 | 29.91 |
| AT1G14560.1 | Thale cress | cytosol | 29.52 | 29.61 |
| AT4G01100.2 | Thale cress | cytosol | 32.23 | 29.23 |
| AT3G21390.2 | Thale cress | cytosol | 28.01 | 26.05 |
| AT5G48970.1 | Thale cress | cytosol | 26.51 | 25.96 |
| AT3G51870.1 | Thale cress | plastid | 29.52 | 25.72 |
| AT4G32400.1 | Thale cress | cytosol | 29.22 | 24.74 |
| AT3G20240.1 | Thale cress | cytosol | 23.49 | 22.41 |
| AT1G78180.1 | Thale cress | plastid | 28.01 | 22.25 |
| AT5G01500.1 | Thale cress | cytosol | 27.71 | 22.17 |
| AT5G64970.1 | Thale cress | cytosol, mitochondrion, plastid | 28.31 | 21.96 |
| AT5G07320.1 | Thale cress | cytosol | 30.72 | 21.29 |
| AT5G51050.1 | Thale cress | cytosol | 31.93 | 21.29 |
| AT5G61810.1 | Thale cress | cytosol | 29.82 | 20.71 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | EntrezGene:824730 | ProteinID:AEE79414.1 | EMBL:AF370255 | ProteinID:ANM65569.1 |
| ArrayExpress:AT3G55640 | EnsemblPlantsGene:AT3G55640 | RefSeq:AT3G55640 | TAIR:AT3G55640 | RefSeq:AT3G55640-TAIR-G | EnsemblPlants:AT3G55640.4 |
| EMBL:AY063072 | ProteinID:CAB81589.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0006839 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | RefSeq:NP_001319759.1 |
| RefSeq:NP_191123.1 | PFAM:PF00153 | PRINTS:PR00926 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF403 |
| UniProt:Q9M058 | SUPFAM:SSF103506 | UniParc:UPI000009E696 | SEG:seg | : | : |
Description
Ca-dependent solute carrier-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M058]
Coordinates
chr3:+:20639721..20642659
Molecular Weight (calculated)
36240.0 Da
IEP (calculated)
10.102
GRAVY (calculated)
0.063
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMQTEARVG VSSGHGVASS SHRLTQDQRS HIESASQLLA GGLAGAFSKT CTAPLSRLTI LFQVQGMHTN AAALRKPSIL HEASRILNEE GLKAFWKGNL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.