Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0007g01280.t01 | Wine grape | cytosol | 75.62 | 81.25 |
| KRH73096 | Soybean | cytosol | 69.81 | 77.06 |
| KRH15037 | Soybean | cytosol | 69.53 | 76.99 |
| AT3G55640.4 | Thale cress | plastid | 66.2 | 71.99 |
| GSMUA_Achr8P02430_001 | Banana | cytosol | 69.25 | 71.23 |
| Zm00001d047838_P001 | Maize | cytosol | 67.59 | 71.14 |
| GSMUA_Achr10P... | Banana | cytosol | 65.93 | 70.62 |
| OQU92863 | Sorghum | cytosol | 67.59 | 70.52 |
| Os03t0267700-01 | Rice | cytosol | 67.31 | 70.23 |
| CDY40244 | Canola | plastid | 64.82 | 69.85 |
| TraesCS4A01G093400.1 | Wheat | cytosol | 64.54 | 68.13 |
| TraesCS4B01G211000.1 | Wheat | plastid | 63.16 | 68.06 |
| Zm00001d039884_P002 | Maize | cytosol | 61.77 | 67.99 |
| OQU92679 | Sorghum | cytosol | 23.27 | 67.74 |
| TraesCS4D01G211700.2 | Wheat | cytosol | 64.27 | 67.64 |
| EES00336 | Sorghum | cytosol | 61.77 | 67.58 |
| HORVU4Hr1G060540.1 | Barley | cytosol | 63.99 | 67.54 |
| Os01t0143100-01 | Rice | mitochondrion | 59.56 | 66.77 |
| Bra007181.1-P | Field mustard | plastid | 64.82 | 65.73 |
| CDY41199 | Canola | plastid | 65.37 | 65.56 |
| TraesCS3A01G058200.1 | Wheat | cytosol, mitochondrion, peroxisome | 58.73 | 64.44 |
| TraesCS3D01G058400.1 | Wheat | cytosol, mitochondrion, peroxisome | 58.73 | 64.44 |
| TraesCS3B01G070700.1 | Wheat | cytosol, mitochondrion, peroxisome | 58.45 | 64.13 |
| GSMUA_Achr6P33950_001 | Banana | plastid | 70.36 | 63.5 |
| HORVU3Hr1G011350.16 | Barley | mitochondrion, plastid | 59.0 | 57.26 |
| VIT_02s0025g01180.t01 | Wine grape | cytosol | 32.96 | 33.62 |
| VIT_15s0046g01290.t01 | Wine grape | cytosol | 31.3 | 31.92 |
| VIT_11s0016g02470.t01 | Wine grape | cytosol | 28.81 | 30.5 |
| VIT_04s0008g01060.t01 | Wine grape | cytosol | 27.15 | 28.49 |
| VIT_05s0020g01380.t01 | Wine grape | cytosol | 24.65 | 26.97 |
| VIT_08s0007g02230.t01 | Wine grape | cytosol, mitochondrion, plastid | 27.42 | 25.98 |
| VIT_04s0008g05240.t01 | Wine grape | cytosol | 26.32 | 23.93 |
| VIT_11s0016g05110.t01 | Wine grape | cytosol | 26.32 | 23.75 |
| VIT_14s0068g00890.t01 | Wine grape | cytosol | 29.36 | 21.68 |
| VIT_09s0054g00790.t01 | Wine grape | cytosol | 21.05 | 21.35 |
| VIT_00s0665g00020.t01 | Wine grape | plastid | 24.38 | 21.31 |
| VIT_17s0000g00030.t01 | Wine grape | plastid | 31.86 | 20.99 |
| VIT_18s0001g05620.t01 | Wine grape | cytosol | 25.48 | 20.77 |
| VIT_10s0042g01030.t01 | Wine grape | cytosol | 6.93 | 20.33 |
Protein Annotations
| Gene3D:1.50.40.10 | EntrezGene:100265022 | wikigene:100265022 | MapMan:24.2.13 | ProteinID:CCB56301 | ProteinID:CCB56301.1 |
| UniProt:F6HNT2 | EMBL:FN595998 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0006839 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:IPR018108 | InterPro:IPR023395 | EntrezGene:LOC100265022 | wikigene:LOC100265022 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier |
| InterPro:Mt_carrier_dom_sf | PFAM:PF00153 | PRINTS:PR00926 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF403 |
| SUPFAM:SSF103506 | UniParc:UPI0002107FDD | ArrayExpress:VIT_13s0019g02440 | EnsemblPlantsGene:VIT_13s0019g02440 | EnsemblPlants:VIT_13s0019g02440.t01 | RefSeq:XP_002282149 |
| RefSeq:XP_002282149.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr13:-:3690888..3696871
Molecular Weight (calculated)
39320.6 Da
IEP (calculated)
10.360
GRAVY (calculated)
0.043
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTEARVGVV VEGGQRALNS GHGGVAVDGT ARKLAQQQKS LHQQSQIGTI PQLLAGGIAG ALSKTCTAPL ARLTILFQVQ GMHSDVATLT KASIWQEASR
101: IIGEEGFRAF WKGNLVTIAH RLPYSSVSFY AYERYKNILH LVPGLESHKR NTSADLGVHF VAGGLAGLTA ASATYPLDLV RTRLAAQTKV IYYRGIGHTL
201: QTIVREEGIW GLYKGLGATL LGVGPSIAIN FSVYETLRSS WHSQRPNDST VLVSLTCGSL SGIASSTATF PLDLVRRRMQ LEGAGGRARV YTTGLFGTFR
301: HIIRTEGLRG LYRGILPEYY KVVPGVGICF MTYETLKNAF ISYRSLNTWH FLGFSNWGKI L
101: IIGEEGFRAF WKGNLVTIAH RLPYSSVSFY AYERYKNILH LVPGLESHKR NTSADLGVHF VAGGLAGLTA ASATYPLDLV RTRLAAQTKV IYYRGIGHTL
201: QTIVREEGIW GLYKGLGATL LGVGPSIAIN FSVYETLRSS WHSQRPNDST VLVSLTCGSL SGIASSTATF PLDLVRRRMQ LEGAGGRARV YTTGLFGTFR
301: HIIRTEGLRG LYRGILPEYY KVVPGVGICF MTYETLKNAF ISYRSLNTWH FLGFSNWGKI L
001: MEARVGVVVE GGQRALNTAT TTAVHNTVVD AGNRKLLQQQ PQTQQTQSCH QHHQSNKQSL NQQQGHFGTV ERLLAGGIAG AFSKTCTAPL ARLTILFQIQ
101: GMQSEAAILS SPNIWHEASR IVKEEGFRAF WKGNLVTVAH RLPYGAVNFY AYEEYKTFLH SNPVLQSYKG NAGVDISVHF VSGGLAGLTA ASATYPLDLV
201: RTRLSAQRNS IYYQGVGHAF RTICREEGIL GLYKGLGATL LGVGPSLAIS FAAYETFKTF WLSHRPNDSN AVVSLGCGSL SGIVSSTATF PLDLVRRRMQ
301: LEGAGGRARV YTTGLFGTFK HIFKTEGMRG LYRGIIPEYY KVVPGVGIAF MTFEELKKLL STVPN
101: GMQSEAAILS SPNIWHEASR IVKEEGFRAF WKGNLVTVAH RLPYGAVNFY AYEEYKTFLH SNPVLQSYKG NAGVDISVHF VSGGLAGLTA ASATYPLDLV
201: RTRLSAQRNS IYYQGVGHAF RTICREEGIL GLYKGLGATL LGVGPSLAIS FAAYETFKTF WLSHRPNDSN AVVSLGCGSL SGIVSSTATF PLDLVRRRMQ
301: LEGAGGRARV YTTGLFGTFK HIFKTEGMRG LYRGIIPEYY KVVPGVGIAF MTFEELKKLL STVPN
Arabidopsis Description
Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4M2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.