Factsheet for VIT_00s0665g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0042g01030.t01	Wine grape	cytosol	28.33	95.12
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	57.38	79.8
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	57.38	79.53
PGSC0003DMT400004751	Potato	mitochondrion	30.75	79.38
Zm00001d052515_P001	Maize	cytosol	27.84	78.77
Zm00001d009318_P001	Maize	cytosol	20.82	76.11
Bra031891.1-P	Field mustard	cytosol	49.64	75.93
Zm00001d028008_P001	Maize	mitochondrion	48.18	73.43
Zm00001d014331_P001	Maize	cytosol	28.57	70.24
GSMUA_Achr2P14780_001	Banana	mitochondrion	57.87	69.08
KRH43178	Soybean	plastid	69.01	68.67
CDX97455	Canola	plastid	24.21	66.23
Solyc05g051560.2.1	Tomato	nucleus	64.89	63.06
PGSC0003DMT400043297	Potato	cytosol, plastid	64.16	62.95
Solyc04g056260.1.1	Tomato	cytosol, nucleus	64.89	62.91
CDY31292	Canola	cytosol	53.27	62.86
CDY14527	Canola	plastid	62.23	61.63
VIT_18s0001g05620.t01	Wine grape	cytosol	66.1	61.63
CDY08834	Canola	plastid	62.23	61.48
Bra024342.1-P	Field mustard	plastid	61.99	61.24
AT5G64970.1	Thale cress	cytosol, mitochondrion, plastid	63.44	61.22
HORVU4Hr1G078650.2	Barley	peroxisome	60.77	60.05
TraesCS4D01G304600.1	Wheat	peroxisome	60.77	59.76
Os03t0191100-01	Rice	mitochondrion, peroxisome, plastid	60.77	59.62
Zm00001d028009_P001	Maize	peroxisome	61.26	59.53
CDX79251	Canola	plastid	57.14	59.3
TraesCS4B01G306400.1	Wheat	peroxisome	60.29	59.29
CDX68026	Canola	plastid	56.9	59.19
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	60.53	59.1
Bra003653.1-P	Field mustard	plastid	56.66	58.94
KXG39987	Sorghum	peroxisome	61.02	58.74
AT1G78180.1	Thale cress	plastid	58.6	57.89
Zm00001d048218_P001	Maize	endoplasmic reticulum	60.53	57.74
CDY33993	Canola	plastid	48.91	56.58
Zm00001d014170_P001	Maize	cytosol	24.21	52.08
CDY39471	Canola	cytosol	36.8	37.91
VIT_02s0025g01180.t01	Wine grape	cytosol	24.94	29.1
VIT_15s0046g01290.t01	Wine grape	cytosol	23.73	27.68
VIT_04s0008g01060.t01	Wine grape	cytosol	22.76	27.33
VIT_11s0016g02470.t01	Wine grape	cytosol	22.52	27.27
VIT_11s0016g05110.t01	Wine grape	cytosol	26.15	27.0
VIT_08s0007g01280.t01	Wine grape	cytosol	21.79	26.79
VIT_04s0008g05240.t01	Wine grape	cytosol	25.18	26.2
VIT_13s0019g02440.t01	Wine grape	cytosol	21.31	24.38
VIT_05s0020g01380.t01	Wine grape	cytosol	19.13	23.94
VIT_08s0007g02230.t01	Wine grape	cytosol, mitochondrion, plastid	21.31	23.1
VIT_09s0054g00790.t01	Wine grape	cytosol	19.37	22.47
VIT_14s0068g00890.t01	Wine grape	cytosol	21.55	18.2
VIT_17s0000g00030.t01	Wine grape	plastid	22.52	16.97

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100240855	wikigene:100240855	EntrezGene:100253279	wikigene:100253279	MapMan:24.2.13
EMBL:AM475488	ProteinID:CAN72834	ProteinID:CAN72834.1	ProteinID:CBI25773	ProteinID:CBI25773.3	UniProt:D7T5J0
EMBL:FN595529	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395
EntrezGene:LOC100240855	wikigene:LOC100240855	EntrezGene:LOC100253279	wikigene:LOC100253279	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF339
SUPFAM:SSF103506	UniParc:UPI00015CDEB0	ArrayExpress:VIT_00s0665g00020	EnsemblPlantsGene:VIT_00s0665g00020	EnsemblPlants:VIT_00s0665g00020.t01	RefSeq:XP_002270363
RefSeq:XP_002270363.1	RefSeq:XP_002273264	RefSeq:XP_002273264.2	SEG:seg	:	:

Description

No Description!

Coordinates

chrUn:-:33816946..33819476

Molecular Weight (calculated)

44993.9 Da

IEP (calculated)

9.883

GRAVY (calculated)

0.051

Length

413 amino acids

Sequence
(BLAST)

001: MLESDLWLTH LIHHSRPSTL SSSFISFKPW GGNRRISGGV GLFRRHKRRG GVFLSVSLWV GKGDDGCVGE SEEEAEEEVV FAVEKTRKSG GGGAGGGAMN
101: TTKHLWAGAV AAMVSRTFVA PLERLKLEYV VRGEQKNLFE LTQKIAASQG LKGFWKGNFV NILRTAPFKS INFYAYDTYR NQLMKLSGKE ENTNFERFLA
201: GAAAGITATL LCLPLDTIRT KMVAPGGEAL GGIIGAFRYM IQTEGFFSLY KGIVPSIISM APSGAVYYGV YDILKSAFLH SPEGKKRILH MKQQSEELSA
301: LEQLELGPLR TLVYGAIAGC CSEVATYPFE VVRRHLQMQV QATKMSALAT TVKLVKQGGV PALYAGLTPS LLQVLPSAAI SYLVYEFMKI VLKVESTCIV
401: NPIKKNSGFA PAS

Best Arabidopsis Sequence Match ( AT5G64970.1 )
(BLAST)

001: MRGLDRWIAE AIRSESLDHN GQIICGGLFL EESLPSSSVS FLSSKDCSVN SCRFSQKSSF LKFRRRNGTR EPLFLSVSLS INESNGEEEE GEGYNGQNGF
101: KSEKGSVLIG GGQESKEKRR VKENGAGALN TTKHLWAGAF AAMVSRTCIA PLERMKLEYI VRGEQGNLLE LIQRIATNEG IRGFWKGNLV NILRTAPFKS
201: INFYAYDTYR GQLLKLSGNE ETTNFERFVA GAAAGVTASL LCLPLDTIRT VMVAPGGEAL GGVVGAFRHM IQTEGFFSLY KGLVPSLVSM APSGAVFYGV
301: YDILKSAYLH TPEGKKRLEH MKQEGEELNA FDQLELGPMR TLLYGAIAGA CSEAATYPFE VVRRRLQMQS HAKRLSAVAT CVKIIEQGGV PALYAGLIPS
401: LLQVLPSAAI SYFVYEFMKV VLKVESSA

Arabidopsis Description

Probable mitochondrial adenine nucleotide transporter BTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV81]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.