Factsheet for PGSC0003DMT400004751

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052515_P001	Maize	cytosol	73.75	80.82
Zm00001d009318_P001	Maize	cytosol	56.25	79.65
Zm00001d014331_P001	Maize	cytosol	74.38	70.83
Zm00001d014170_P001	Maize	cytosol	61.25	51.04
VIT_10s0042g01030.t01	Wine grape	cytosol	38.75	50.41
Zm00001d028008_P001	Maize	mitochondrion	82.5	48.71
Bra031891.1-P	Field mustard	cytosol	74.38	44.07
GSMUA_Achr6P03370_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	80.62	43.43
GSMUA_Achr4P24190_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	76.88	41.28
Solyc04g056260.1.1	Tomato	cytosol, nucleus	98.75	37.09
PGSC0003DMT400043297	Potato	cytosol, plastid	93.12	35.39
GSMUA_Achr2P14780_001	Banana	mitochondrion	75.62	34.97
KRH43178	Soybean	plastid	81.88	31.57
HORVU4Hr1G078650.2	Barley	peroxisome	81.88	31.34
TraesCS4D01G304600.1	Wheat	peroxisome	81.88	31.19
TraesCS4B01G306400.1	Wheat	peroxisome	81.88	31.19
Zm00001d028009_P001	Maize	peroxisome	82.5	31.06
TraesCS4A01G407200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	81.88	30.97
VIT_00s0665g00020.t01	Wine grape	plastid	79.38	30.75
CDY14527	Canola	plastid	80.0	30.7
Os03t0191100-01	Rice	mitochondrion, peroxisome, plastid	80.62	30.64
CDY08834	Canola	plastid	80.0	30.62
Bra024342.1-P	Field mustard	plastid	79.38	30.38
Zm00001d048218_P001	Maize	endoplasmic reticulum	81.25	30.02
KXG39987	Sorghum	peroxisome	80.0	29.84
AT5G64970.1	Thale cress	cytosol, mitochondrion, plastid	79.38	29.67
Bra003653.1-P	Field mustard	plastid	71.88	28.97
CDX79251	Canola	plastid	71.88	28.89
CDX68026	Canola	plastid	71.25	28.72
PGSC0003DMT400016387	Potato	cytosol	76.25	28.18
AT1G78180.1	Thale cress	plastid	73.12	27.99
CDY31292	Canola	cytosol	60.0	27.43
CDX97455	Canola	plastid	23.75	25.17
CDY33993	Canola	plastid	50.62	22.69
PGSC0003DMT400087691	Potato	mitochondrion	22.5	21.56
PGSC0003DMT400074454	Potato	plastid	23.75	21.23
CDY39471	Canola	cytosol	33.12	13.22
PGSC0003DMT400049872	Potato	cytosol	28.12	12.68
PGSC0003DMT400000597	Potato	cytosol	28.12	12.68
PGSC0003DMT400062351	Potato	cytosol	25.62	11.65
PGSC0003DMT400053564	Potato	cytosol, nucleus, plastid	28.75	11.56
PGSC0003DMT400030778	Potato	cytosol, peroxisome, plastid	26.88	11.32
PGSC0003DMT400021172	Potato	plastid	23.75	11.31
PGSC0003DMT400000910	Potato	cytosol	23.12	10.82
PGSC0003DMT400023766	Potato	cytosol	23.12	10.45
PGSC0003DMT400036927	Potato	cytosol	22.5	7.36

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	UniProt:M0ZNW4	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	EnsemblPlantsGene:PGSC0003DMG400001883	PGSC:PGSC0003DMG400001883	EnsemblPlants:PGSC0003DMT400004751
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF339	SUPFAM:SSF103506	UniParc:UPI0002960A9E
SEG:seg	:	:	:	:	:

Description

Protein brittle-1, chloroplast [Source:PGSC_GENE;Acc:PGSC0003DMG400001883]

Coordinates

chr4:-:50725958..50727899

Molecular Weight (calculated)

17199.1 Da

IEP (calculated)

8.422

GRAVY (calculated)

0.162

Length

160 amino acids

Sequence
(BLAST)

001: MDTIRTVMVA PGGEALGGLI GTSRHMIQTE GFFSLYKGLV PSIMSMAPSG AVFYGVYDIL KSAYLHSPEG RKRLENMKQG EDLNALDQLE LGTVRTLVYG
101: AIAGACAEAA TYPFEVVRRQ LQLQVRATKM STLATTLKIV EQGGIPALYT GLTPSLLQVS

Best Arabidopsis Sequence Match ( AT5G64970.1 )
(BLAST)

001: MRGLDRWIAE AIRSESLDHN GQIICGGLFL EESLPSSSVS FLSSKDCSVN SCRFSQKSSF LKFRRRNGTR EPLFLSVSLS INESNGEEEE GEGYNGQNGF
101: KSEKGSVLIG GGQESKEKRR VKENGAGALN TTKHLWAGAF AAMVSRTCIA PLERMKLEYI VRGEQGNLLE LIQRIATNEG IRGFWKGNLV NILRTAPFKS
201: INFYAYDTYR GQLLKLSGNE ETTNFERFVA GAAAGVTASL LCLPLDTIRT VMVAPGGEAL GGVVGAFRHM IQTEGFFSLY KGLVPSLVSM APSGAVFYGV
301: YDILKSAYLH TPEGKKRLEH MKQEGEELNA FDQLELGPMR TLLYGAIAGA CSEAATYPFE VVRRRLQMQS HAKRLSAVAT CVKIIEQGGV PALYAGLIPS
401: LLQVLPSAAI SYFVYEFMKV VLKVESSA

Arabidopsis Description

Probable mitochondrial adenine nucleotide transporter BTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV81]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.