Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g068720.2.1 | Tomato | cytosol | 98.88 | 35.4 |
| CDX70028 | Canola | cytosol | 70.39 | 31.74 |
| PGSC0003DMT400036927 | Potato | cytosol | 82.12 | 30.06 |
| KRH63894 | Soybean | cytosol | 78.21 | 29.91 |
| KRH41046 | Soybean | cytosol | 80.45 | 29.27 |
| Bra009271.1-P | Field mustard | cytosol | 70.39 | 29.23 |
| KRH54061 | Soybean | cytosol | 77.65 | 29.2 |
| KRH59718 | Soybean | cytosol | 81.01 | 29.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 80.45 | 28.02 |
| CDY14050 | Canola | cytosol | 72.07 | 27.56 |
| Os06t0604500-01 | Rice | nucleus | 78.77 | 27.38 |
| TraesCS7B01G278000.1 | Wheat | cytosol, plastid | 78.77 | 27.38 |
| GSMUA_Achr8P26070_001 | Banana | cytosol | 78.77 | 27.38 |
| Bra028702.1-P | Field mustard | cytosol | 71.51 | 27.35 |
| CDY55175 | Canola | cytosol | 71.51 | 27.35 |
| TraesCS7D01G372900.1 | Wheat | cytosol, plastid | 78.77 | 27.17 |
| TraesCS7A01G376600.1 | Wheat | cytosol, plastid | 78.77 | 27.12 |
| HORVU7Hr1G090020.9 | Barley | mitochondrion | 78.77 | 26.96 |
| AT5G07320.1 | Thale cress | cytosol | 71.51 | 26.72 |
| AT5G51050.1 | Thale cress | cytosol | 74.3 | 26.71 |
| VIT_17s0000g00030.t01 | Wine grape | plastid | 81.56 | 26.64 |
| EER88619 | Sorghum | cytosol, plastid | 77.09 | 26.64 |
| AT5G61810.1 | Thale cress | cytosol | 70.95 | 26.57 |
| CDY00231 | Canola | cytosol | 70.39 | 26.42 |
| Bra019615.1-P | Field mustard | cytosol | 70.39 | 26.42 |
| CDX86953 | Canola | cytosol | 70.39 | 26.42 |
| KXG29744 | Sorghum | plastid | 77.65 | 26.33 |
| CDX71683 | Canola | cytosol | 72.63 | 26.0 |
| GSMUA_Achr5P05990_001 | Banana | cytosol | 74.3 | 25.88 |
| Bra035722.1-P | Field mustard | cytosol | 72.07 | 25.85 |
| CDY05832 | Canola | cytosol | 72.07 | 25.8 |
| PGSC0003DMT400087691 | Potato | mitochondrion | 24.02 | 25.75 |
| Zm00001d053640_P001 | Maize | plasma membrane | 75.98 | 25.71 |
| Zm00001d046509_P002 | Maize | plastid | 76.54 | 24.82 |
| Os02t0201500-00 | Rice | plastid | 78.21 | 24.14 |
| PGSC0003DMT400049872 | Potato | cytosol | 47.49 | 23.94 |
| PGSC0003DMT400004751 | Potato | mitochondrion | 21.23 | 23.75 |
| PGSC0003DMT400000597 | Potato | cytosol | 46.93 | 23.66 |
| CDX98981 | Canola | endoplasmic reticulum, golgi | 54.75 | 23.0 |
| PGSC0003DMT400000910 | Potato | cytosol | 37.43 | 19.59 |
| PGSC0003DMT400021172 | Potato | plastid | 35.2 | 18.75 |
| PGSC0003DMT400062351 | Potato | cytosol | 35.75 | 18.18 |
| PGSC0003DMT400053564 | Potato | cytosol, nucleus, plastid | 35.2 | 15.83 |
| PGSC0003DMT400023766 | Potato | cytosol | 29.05 | 14.69 |
| PGSC0003DMT400030778 | Potato | cytosol, peroxisome, plastid | 29.61 | 13.95 |
| PGSC0003DMT400016387 | Potato | cytosol | 31.84 | 13.16 |
| PGSC0003DMT400043297 | Potato | cytosol, plastid | 29.61 | 12.59 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR018108 | InterPro:IPR023395 | UniProt:M1CTQ0 | InterPro:Mit_carrier |
| InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PFAM:PF00153 | EnsemblPlantsGene:PGSC0003DMG402028933 | PGSC:PGSC0003DMG402028933 | EnsemblPlants:PGSC0003DMT400074454 |
| PRINTS:PR00926 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF454 | SUPFAM:SSF103506 | TMHMM:TMhelix |
| UniParc:UPI0002957B4D | : | : | : | : | : |
Description
Succinate/fumarate mitochondrial transporter [Source:PGSC_GENE;Acc:PGSC0003DMG402028933]
Coordinates
chr6:-:50413034..50414720
Molecular Weight (calculated)
19446.9 Da
IEP (calculated)
9.271
GRAVY (calculated)
0.139
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGMAGAIA QTAIYPMDLV KTRLQTHSCE SGSVPSLRKL SKDIFIQEGP RAFYRGLVPS LLGIIPYAGI DLAAYETLKD LSKVYILHDS EAGPLVQLGC
101: GTISGALGAT CVYPLQVIRT RMQADSAYKG MADVFRKTVQ REGFRGFYKG LFPNLLKVVP AASITYLVYE SMKKSLDLD
101: GTISGALGAT CVYPLQVIRT RMQADSAYKG MADVFRKTVQ REGFRGFYKG LFPNLLKVVP AASITYLVYE SMKKSLDLD
001: MSTTHVGLPT KMEATKSSKQ NCCNPVKKPG PVSIDHVLLA LRETREERDL RIRSLFSFFD SENVGYLDCA QIEKGLCALQ IPSGYKYAKE LFRVCDANRD
101: GRVDYHEFRR YMDDKELELY RIFQAIDVEH NGCISPEGLW DSLVKAGIEI KDEELARFVE HVDKDNDGII MFEEWRDFLL LYPHEATIEN IYHHWERVCL
201: VDIGEQAVIP EGISKHIKRS NYFIAGGIAG AASRTATAPL DRLKVLLQIQ KTDARIREAI KLIWKQGGVR GFFRGNGLNI VKVAPESAIK FYAYELFKNA
301: IGENMGEDKA DIGTTVRLFA GGMAGAVAQA SIYPLDLVKT RLQTYTSQAG VAVPRLGTLT KDILVHEGPR AFYKGLFPSL LGIIPYAGID LAAYETLKDL
401: SRTYILQDAE PGPLVQLGCG TISGALGATC VYPLQVVRTR MQAERARTSM SGVFRRTISE EGYRALYKGL LPNLLKVVPA ASITYMVYEA MKKSLELD
101: GRVDYHEFRR YMDDKELELY RIFQAIDVEH NGCISPEGLW DSLVKAGIEI KDEELARFVE HVDKDNDGII MFEEWRDFLL LYPHEATIEN IYHHWERVCL
201: VDIGEQAVIP EGISKHIKRS NYFIAGGIAG AASRTATAPL DRLKVLLQIQ KTDARIREAI KLIWKQGGVR GFFRGNGLNI VKVAPESAIK FYAYELFKNA
301: IGENMGEDKA DIGTTVRLFA GGMAGAVAQA SIYPLDLVKT RLQTYTSQAG VAVPRLGTLT KDILVHEGPR AFYKGLFPSL LGIIPYAGID LAAYETLKDL
401: SRTYILQDAE PGPLVQLGCG TISGALGATC VYPLQVVRTR MQAERARTSM SGVFRRTISE EGYRALYKGL LPNLLKVVPA ASITYMVYEA MKKSLELD
Arabidopsis Description
Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT5G51050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.